RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ACAP1Q15027 740 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ANGPT1Q15389 498 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TRIM71Q2Q1W2 868 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TMED8Q6PL24 325 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TMC7Q7Z402 723 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ZDHHC13Q8IUH4 622 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 AFG1LQ8WV93 481 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 KAT2BQ92831 832 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 CHAMP1Q96JM3 812 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TRIM56Q9BRZ2 755 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ALG1Q9BT22 464 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 DNAJC25Q9H1X3 360 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 NYAP2Q9P242 653 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 PLAGL2Q9UPG8 496 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ATRXP46100 2492 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 EMSYQ7Z589 1322 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 RSPH10B2B2RC85 870 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 PI15O43692 258 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 MBD4O95243 580 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 ARIH2O95376 493 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 ECEL1O95672 775 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 B3GALT4O96024 378 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 MMP3P08254 477 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 RSPH10BP0C881 870 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 ARP10275 920 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 DNAJB1P25685 340 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 CLCN5P51795 746 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 STAT2P52630 851 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SGO2Q562F6 1265 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SLFN13Q68D06 897 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 RNF43Q68DV7 783 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 BEND4Q6ZU67 534 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 CHST3Q7LGC8 479 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 UBALD2Q8IYN6 164 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 DCLK2Q8N568 766 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 CYP2W1Q8TAV3 490 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SCFD2Q8WU76 684 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SUSD6Q92537 303 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SEPT8Q92599 483 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 EAF2Q96CJ1 260 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-210ENST00000485247 DMRTB1Q96MA1 342 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 FAM83CQ9BQN1 747 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 APOL5Q9BWW9 433 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 KCNF1Q9H3M0 494 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 ATP8A2Q9NTI2 1148 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 ADD3Q9UEY8 706 aaKnown RBP6.31□□□□□ -1.4
PTPN4-210ENST00000485247 SORCS3Q9UPU3 1222 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 RWDD3Q9Y3V2 267 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 R4GN57 208 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 DMXL1Q9Y485 3027 aa6.31□□□□□ -1.4
PTPN4-210ENST00000485247 RALGAPA2Q2PPJ7 1873 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 MAP1BP46821 2468 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 PER2O15055 1255 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 GSC2O15499 205 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 SURF6O75683 361 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 MED26O95402 600 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 GNAI2P04899 355 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 DRD2P14416 443 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CASTP20810 708 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CD97P48960 835 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 GRM2Q14416 872 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 ALDH1L2Q3SY69 923 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 EXOSC6Q5RKV6 272 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CTR9Q6PD62 1173 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 DHX37Q8IY37 1157 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 C12orf50Q8NA57 414 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 EPS8L3Q8TE67 593 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CHURC1Q8WUH1 139 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 HAUS7Q99871 368 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 API5Q9BZZ5 524 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 TLE6Q9H808 572 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 MKNK2Q9HBH9 465 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 BAZ2AQ9UIF9 1905 aaKnown RBP6.3□□□□□ -1.4
PTPN4-210ENST00000485247 ZNF292O60281 2723 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 CHD6Q8TD26 2715 aa6.3□□□□□ -1.4
PTPN4-210ENST00000485247 ADGRA3Q8IWK6 1321 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 LCTP09848 1927 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 NFIBO00712 420 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 GAS2O43903 313 aaKnown RBP6.29□□□□□ -1.4
PTPN4-210ENST00000485247 BCAR3O75815 825 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 ITGB1P05556 798 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 CTSHP09668 335 aa6.29□□□□□ -1.4
PTPN4-210ENST00000485247 ZNF286BP0CG31 522 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 501.1 ms