RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.8
USF1-204ENST00000472217 ARL2P36404 184 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 MBTD1Q05BQ5 628 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 POU5F1BQ06416 359 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 COASYQ13057 564 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 KCNC3Q14003 757 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 TFDP1Q14186 410 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 DUSP6Q16828 381 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 TMC7Q7Z402 723 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 POLR3CQ9BUI4 534 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 POLR3FQ9H1D9 316 aaPredicted RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 NRDE2Q9H7Z3 1164 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 RSAD1Q9HA92 442 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 NGRNQ9NPE2 291 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 DNAJB4Q9UDY4 337 aa10.03□□□□□ -0.8
USF1-204ENST00000472217 DBR1Q9UK59 544 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
USF1-204ENST00000472217 INO80B-WBP1J3KQ70 363 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 ST18O60284 1047 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 NCLP19338 710 aaKnown RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 COL9A1P20849 921 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 RPA1P27694 616 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 AXLP30530 894 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 TRAPPC10P48553 1259 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 TOB1P50616 345 aaPredicted RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 SMC1AQ14683 1233 aaKnown RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 PCBP1Q15365 356 aaKnown RBP eCLIP10.02□□□□□ -0.81
USF1-204ENST00000472217 AMHR2Q16671 573 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 MAEAQ7L5Y9 396 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 SMG8Q8ND04 991 aaKnown RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 ERMNQ8TAM6 284 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 URGCPQ8TCY9 931 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 IGSF21Q96ID5 467 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 CPB2Q96IY4 423 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 NACC1Q96RE7 527 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 NFKBIZQ9BYH8 718 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 C11orf16Q9NQ32 467 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.81
USF1-204ENST00000472217 IPPQ9Y573 584 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 CNTNAP2Q9UHC6 1331 aa10.02□□□□□ -0.81
USF1-204ENST00000472217 FAM86C2PA6NEL3 165 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 C2orf71A6NGG8 1288 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 LRRIQ4A6NIV6 560 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 B4GALT5O43286 388 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 DDHD2O94830 711 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 POMCP01189 267 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 GALTP07902 379 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 ITGA4P13612 1032 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 ARF4P18085 180 aaPredicted RBP10.01□□□□□ -0.81
USF1-204ENST00000472217 SLC11A1P49279 550 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
USF1-204ENST00000472217 NCBP1Q09161 790 aaKnown RBP10.01□□□□□ -0.81
USF1-204ENST00000472217 ECM1Q16610 540 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 LLGL2Q6P1M3 1020 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 TMEM184AQ6ZMB5 413 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 VPS52Q8N1B4 723 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 MRPL43Q8N983 215 aaKnown RBP10.01□□□□□ -0.81
USF1-204ENST00000472217 CNNM3Q8NE01 707 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 MCPH1Q8NEM0 835 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 AUTS2Q8WXX7 1259 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 CCDC51Q96ER9 411 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 TMX3Q96JJ7 454 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
USF1-204ENST00000472217 LRFN3Q9BTN0 628 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 ZBP1Q9H171 429 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
USF1-204ENST00000472217 LRWD1Q9UFC0 647 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 RAPGEFL1Q9UHV5 662 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 KIF3AQ9Y496 699 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 HES2Q9Y543 173 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 NCOR1O75376 2440 aa10.01□□□□□ -0.81
USF1-204ENST00000472217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10□□□□□ -0.81
USF1-204ENST00000472217 ARHGEF35A5YM69 484 aa10□□□□□ -0.81
USF1-204ENST00000472217 CARNS1A5YM72 827 aa10□□□□□ -0.81
USF1-204ENST00000472217 GPR37L1O60883 481 aa10□□□□□ -0.81
USF1-204ENST00000472217 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
USF1-204ENST00000472217 MUTP22033 750 aa10□□□□□ -0.81
USF1-204ENST00000472217 CA8P35219 290 aa10□□□□□ -0.81
USF1-204ENST00000472217 CCT6AP40227 531 aaKnown RBP10□□□□□ -0.81
USF1-204ENST00000472217 MLH1P40692 756 aa10□□□□□ -0.81
USF1-204ENST00000472217 PTGDRQ13258 359 aa10□□□□□ -0.81
USF1-204ENST00000472217 TMEM31Q5JXX7 168 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms