RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PNNQ9H307 717 aaKnown RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 EPB41L4BQ9H329 900 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 KCNK12Q9HB15 430 aa4.48□□□□□ -1.69
LRCH3-213ENST00000471667 DCP1AQ9NPI6 582 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 HERC5Q9UII4 1024 aaKnown RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 USP15Q9Y4E8 981 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-213ENST00000471667 MAPK8IP3Q9UPT6 1336 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 DOCK1Q14185 1865 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 USP9XQ93008 2570 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 ABHD14A-ACY1A0A1B0GW23 586 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 SNAP23O00161 211 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 GFRA2O00451 464 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TBX10O75333 385 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 KRT38O76015 456 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 SLC25A27O95847 323 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 ESR1P03372 595 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 RB1P06400 928 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TMEM253P0C7T8 217 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 ERCC3P19447 782 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 COPB2P35606 906 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 GJA9P57773 515 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 ERVFC1P60507 584 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 DLX2Q07687 328 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 SEPT6Q14141 434 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 CCDC57Q2TAC2 916 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 RALGPS1Q5JS13 557 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 N4BP2L1Q5TBK1 243 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 CCSAPQ6IQ19 270 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 CNKSR3Q6P9H4 555 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 LILRA6Q6PI73 481 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 LDHAL6AQ6ZMR3 332 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TMPRSS7Q7RTY8 843 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TMEM192Q8IY95 271 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 YME1L1Q96TA2 773 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 DPH2Q9BQC3 489 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-213ENST00000471667 SPATC1LQ9H0A9 340 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 AP5M1Q9H0R1 490 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TRPV6Q9H1D0 765 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 HOXC10Q9NYD6 342 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 TMEM59LQ9UK28 342 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 WDR87Q6ZQQ6 2873 aa4.47□□□□□ -1.69
LRCH3-213ENST00000471667 CAPN8A6NHC0 703 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 DDTLA6NHG4 134 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 TBC1D4O60343 1298 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 LRP3O75074 770 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 CNMDO75829 334 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 LDHBP07195 334 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 P4HBP07237 508 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 IQCF3P0C7M6 154 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 SP9P0CG40 484 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 CTNNB1P35222 781 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 HK2P52789 917 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 RPS26P62854 115 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 LMOD3Q0VAK6 560 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 HYAL1Q12794 435 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 ADAM15Q13444 863 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 FAM47CQ5HY64 1035 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 CXCL17Q6UXB2 119 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 ATG14Q6ZNE5 492 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 RUFY4Q6ZNE9 571 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 CATSPERGQ6ZRH7 1159 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 UBE3BQ7Z3V4 1068 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 MRPL41Q8IXM3 137 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 CRACR2BQ8N4Y2 399 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 SLC43A3Q8NBI5 491 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 SUMF1Q8NBK3 374 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 FAM84BQ96KN1 310 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 NEK1Q96PY6 1258 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 MOV10L1Q9BXT6 1211 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 ALDH8A1Q9H2A2 487 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 TJP2Q9UDY2 1190 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 SMG5Q9UPR3 1016 aaKnown RBP4.46□□□□□ -1.7
LRCH3-213ENST00000471667 PCDHB5Q9Y5E4 795 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 PCDHGA2Q9Y5H1 932 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 PTPRFP10586 1907 aa4.46□□□□□ -1.7
LRCH3-213ENST00000471667 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 DMXL1Q9Y485 3027 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 ASPMQ8IZT6 3477 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 MYADML2A6NDP7 307 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 TCAF2A6NFQ2 919 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 CYSRT1A8MQ03 144 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 WASH4PA8MWX3 477 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 ETV2O00321 342 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-213ENST00000471667 HPXP02790 462 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 PGRP06401 933 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 MED14OSP0DP75 135 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 CYP2C9P11712 490 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 EIF4BP23588 611 aaKnown RBP4.45□□□□□ -1.7
LRCH3-213ENST00000471667 ETV3P41162 512 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 PLCD1P51178 756 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 GCKRQ14397 625 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 COG2Q14746 738 aa4.45□□□□□ -1.7
LRCH3-213ENST00000471667 ZYXQ15942 572 aaKnown RBP4.45□□□□□ -1.7
LRCH3-213ENST00000471667 BRDTQ58F21 947 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-213ENST00000471667 LARP1BQ659C4 914 aaKnown RBP4.45□□□□□ -1.7
LRCH3-213ENST00000471667 CWF19L1Q69YN2 538 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms