RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 OTOP2Q7RTS6 562 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 DEPTORQ8TB45 409 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 H0YCG3 227 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 GADD45BO75293 160 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 ABCD1P33897 745 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 SMTNP53814 917 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 AMHR2Q16671 573 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 DYMQ7RTS9 669 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 TIGD1Q96MW7 591 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 FIZ1Q96SL8 496 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 TMX1Q9H3N1 280 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 FZD8Q9H461 694 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 CHST12Q9NRB3 414 aa16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE1-203ENST00000470278 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 SFI1A8K8P3 1242 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 TSPAN1O60635 241 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 ERLIN2O94905 339 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 AXLP30530 894 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 DSC3Q14574 896 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 MAPK6Q16659 721 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 TJAP1Q5JTD0 557 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 CCDC65Q8IXS2 484 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 MYCT1Q8N699 235 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 TMEM161BQ8NDZ6 487 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 LINC01599Q8WXQ3 324 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 STAMQ92783 540 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 TMEM134Q9H6X4 195 aa16.46■□□□□ 0.23
CDC42SE1-203ENST00000470278 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 TRAK2O60296 914 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 NR1I2O75469 434 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 LIG1P18858 919 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 ASIC1P78348 528 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 EHHADHQ08426 723 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 UNC13DQ70J99 1090 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 FAM178BQ8IXR5 827 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC9A7Q96T83 725 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 RGS18Q9NS28 235 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 COL4A6Q14031 1691 aa16.45■□□□□ 0.22
CDC42SE1-203ENST00000470278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 K7ERI5 159 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 ACKR2O00590 384 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 SLC16A4O15374 487 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 MGEA5O60502 916 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 PRKCBP05771 671 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 IDEP14735 1019 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 FGFR4P22455 802 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 HOXA11P31270 313 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 AFMP43652 599 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 KCNJ6P48051 423 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 COASYQ13057 564 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 CUL4BQ13620 913 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 RAB30Q15771 203 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 SPRED2Q7Z698 418 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 PHOSPHO2Q8TCD6 241 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZHX3Q9H4I2 956 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 TTC3P53804 2025 aa16.44■□□□□ 0.22
CDC42SE1-203ENST00000470278 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 DENND3A2RUS2 1198 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZBBXA8MT70 800 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 K7ENM7 598 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 PPP1R37O75864 691 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 AMHP03971 560 aa16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 ZSCAN20P17040 1043 aaPredicted RBP16.43■□□□□ 0.22
CDC42SE1-203ENST00000470278 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms