RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 USP18Q9UMW8 372 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 LUC7L2Q9Y383 392 aaKnown RBP2.56□□□□□ -2
NUCKS1-202ENST00000464938 IPPQ9Y573 584 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MRFAP1Q9Y605 127 aa2.56□□□□□ -2
NUCKS1-202ENST00000464938 MTSS1O43312 755 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 POU2F2P09086 479 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 LTA4HP09960 611 aaKnown RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 ZNF888P0CJ79 500 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 PF4V1P10720 104 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 OSMP13725 252 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 HNRNPLP14866 589 aaKnown RBP eCLIP2.55□□□□□ -2
NUCKS1-202ENST00000464938 CCND1P24385 295 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CTSSP25774 331 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CYP2C19P33261 490 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 ADCY8P40145 1251 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 KCNQ1P51787 676 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 ADCY7P51828 1080 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 MGAT2Q10469 447 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 PCOLCEQ15113 449 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 UBE3CQ15386 1083 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 TBR1Q16650 682 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 RRP12Q5JTH9 1297 aaKnown RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 ATAT1Q5SQI0 421 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CCDC181Q5TID7 509 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 TCERG1LQ5VWI1 586 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CYB5RLQ6IPT4 315 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 KLHDC10Q6PID8 442 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 EPM2AIP1Q7L775 607 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 PNMA8AQ86V59 439 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 THEMISQ8N1K5 641 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 LILRA3Q8N6C8 439 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 MAGEB6Q8N7X4 407 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 GLB1L3Q8NCI6 653 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 GPR156Q8NFN8 814 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 TTC8Q8TAM2 541 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CFHR4Q92496 578 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 ACE2Q9BYF1 805 aaPredicted RBP2.55□□□□□ -2
NUCKS1-202ENST00000464938 ENKD1Q9H0I2 346 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 SERPINB13Q9UIV8 391 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 MAGEL2Q9UJ55 1249 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 CDC42EP3Q9UKI2 254 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 INVSQ9Y283 1065 aa2.55□□□□□ -2
NUCKS1-202ENST00000464938 RPTORQ8N122 1335 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MROH6A6NGR9 719 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MATN2O00339 956 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 HTRA2O43464 458 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 XPOTO43592 962 aaKnown RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 AKAP8O43823 692 aaKnown RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 FSBPO95073 299 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 HMGCRP04035 888 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 U2AF1L5P0DN76 240 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 GSPT1P15170 499 aaKnown RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 KIR2DL3P43628 341 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MRE11P49959 708 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 STAT5BP51692 787 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 WNT3AP56704 352 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 NRG3P56975 720 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 CDK17Q00537 523 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 U2AF1Q01081 240 aaKnown RBP eCLIP2.54□□□□□ -2
NUCKS1-202ENST00000464938 DSC2Q02487 901 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MGAT5Q09328 741 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 USP10Q14694 798 aaKnown RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 SEPT2Q15019 361 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 SPATS1Q496A3 300 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MUM1L1Q5H9M0 696 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 GJC2Q5T442 439 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 AGBL4Q5VU57 503 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MCTP2Q6DN12 878 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 ABHD15Q6UXT9 468 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 Q6ZVL8 140 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 OTOP2Q7RTS6 562 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 GLB1L2Q8IW92 636 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 TPH2Q8IWU9 490 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 IFNL2Q8IZJ0 200 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 MYO1HQ8N1T3 1032 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 PLA2G15Q8NCC3 412 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 OR2I1PQ8NGU4 316 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.54□□□□□ -2
NUCKS1-202ENST00000464938 SLC35G2Q8TBE7 412 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 SNX33Q8WV41 574 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 RIN2Q8WYP3 895 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 HPS3Q969F9 1004 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 RUNDC1Q96C34 613 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 LCORQ96JN0 433 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 DMRTA2Q96SC8 542 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 OR10A2Q9H208 303 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 BARX1Q9HBU1 254 aaPredicted RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 MSL2Q9HCI7 577 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 JADE2Q9NQC1 790 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 ANLNQ9NQW6 1124 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 RBM12Q9NTZ6 932 aaKnown RBP2.54□□□□□ -2
NUCKS1-202ENST00000464938 DNAI1Q9UI46 699 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 ZBTB21Q9ULJ3 1066 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 LIMCH1Q9UPQ0 1083 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 SIK3Q9Y2K2 1263 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 PTPN22Q9Y2R2 807 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 SLC4A7Q9Y6M7 1214 aa2.54□□□□□ -2
NUCKS1-202ENST00000464938 KIF3BO15066 747 aa2.53□□□□□ -2
NUCKS1-202ENST00000464938 ARHGAP6O43182 974 aa2.53□□□□□ -2
NUCKS1-202ENST00000464938 SUV39H1O43463 412 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms