RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 DOPEY1Q5JWR5 2465 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 EMSYQ7Z589 1322 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 RAD50Q92878 1312 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 A0A1W2PRG0 241 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 TMEM8BA6NDV4 472 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 ASB14A6NK59 587 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 TAF4O00268 1085 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 MPHOSPH10O00566 681 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 SLC30A4O14863 429 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 GLP2RO95838 553 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 HMGB1P09429 215 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 SP9P0CG40 484 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 SRGAP2BP0DMP2 458 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 ALAS2P22557 587 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 BMPR1AP36894 532 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 NRIP1P48552 1158 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 RING1Q06587 406 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 C19orf57Q0VDD7 668 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 TCTN1Q2MV58 587 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 SNRNP48Q6IEG0 339 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 GDF6Q6KF10 455 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 UNQ6494/PRO21346Q6UXR6 183 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 C1orf229Q6ZS94 237 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 FIBCD1Q8N539 461 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 TAB3Q8N5C8 712 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 IL22RA1Q8N6P7 574 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 ANKRD44Q8N8A2 993 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 CPLX3Q8WVH0 158 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 RIN2Q8WYP3 895 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 MRFAP1L1Q96HT8 127 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 FGD4Q96M96 766 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 CCDC113Q9H0I3 377 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 LRP2BPQ9P2M1 347 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 FBXO40Q9UH90 709 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 PPP1R9AQ9ULJ8 1098 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 ADAMTS8Q9UP79 889 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 PPME1Q9Y570 386 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 KIAA1217Q5T5P2 1943 aa4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 BAZ2AQ9UIF9 1905 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-211ENST00000460558 LOXHD1Q8IVV2 1947 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 KPNA6O60684 536 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 BPNT1O95861 308 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 CYP11A1P05108 521 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 NBPF7P0C2Y1 421 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 CKBP12277 381 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 PTGS1P23219 599 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 HSD3B2P26439 372 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 GUCY1A2P33402 732 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 KRT76Q01546 638 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 DDR2Q16832 855 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 KIAA1755Q5JYT7 1200 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 DIEXFQ68CQ4 756 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 ATG9AQ7Z3C6 839 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 ADGRD2Q7Z7M1 963 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 TTC6Q86TZ1 520 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 RBM23Q86U06 439 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 CELF2-AS1Q8N7Q2 184 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 REPS2Q8NFH8 660 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 GPBAR1Q8TDU6 330 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 NUDT8Q8WV74 236 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 TOP1MTQ969P6 601 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 ACDQ96AP0 544 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 IL17RAQ96F46 866 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 FERD3LQ96RJ6 166 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 PLVAPQ9BX97 442 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 TRIM55Q9BYV6 548 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 IFIH1Q9BYX4 1025 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 SMOC2Q9H3U7 446 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 VCPKMTQ9H867 229 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 CBX8Q9HC52 389 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 JPH1Q9HDC5 661 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 FBXO28Q9NVF7 368 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 FBXL21Q9UKT6 434 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 PCDHB14Q9Y5E9 798 aa4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 MRPL42Q9Y6G3 142 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-211ENST00000460558 PIEZO2Q9H5I5 2752 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 FAM221BA6H8Z2 402 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 EIF4E1BA6NMX2 242 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SRRM3A6NNA2 597 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CYSRT1A8MQ03 144 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 C1QTNF9BB2RNN3 333 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 C2CD4DB7Z1M9 353 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 FSCN2O14926 492 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 LILRB5O75023 590 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CIAO1O76071 339 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ECEL1O95672 775 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ASGR2P07307 311 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CTSBP07858 339 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 C1QTNF9P0C862 333 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ADORA1P30542 326 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 MCM4P33991 863 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SHMT1P34896 483 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CDK8P49336 464 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms