RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 HINFPQ9BQA5 517 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 SH2D3AQ9BRG2 576 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 NIFKQ9BYG3 293 aaKnown RBP19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 FOXQ1Q9C009 403 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 UNC45AQ9H3U1 944 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 ARHGEF3Q9NR81 526 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 PCDHB2Q9Y5E7 798 aa19.36■□□□□ 0.69
UBE2D4-209ENST00000454428 PATJQ8NI35 1801 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 ANHXE9PGG2 379 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 LRRN2O75325 713 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 SOD2P04179 222 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 RAB27AP51159 221 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 EXOSC10Q01780 885 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 KIAA0319Q5VV43 1072 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 ZC3H14Q6PJT7 736 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 CYP26C1Q6V0L0 522 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 MRPL10Q7Z7H8 261 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 ST13P5Q8NFI4 369 aaPredicted RBP19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 NXPE3Q969Y0 559 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 TMEM175Q9BSA9 504 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 HERC2P3Q9BVR0 1158 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 IFT122Q9HBG6 1241 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 STK39Q9UEW8 545 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 MIA3Q5JRA6 1907 aa19.35■□□□□ 0.69
UBE2D4-209ENST00000454428 MYH15Q9Y2K3 1946 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 CHMP2AO43633 222 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 ALDH2P05091 517 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 RFX1P22670 979 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 AK2P54819 239 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 CDC42EP1Q00587 391 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 HTR4Q13639 388 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 MTERF2Q49AM1 385 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 UBXN11Q5T124 520 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 ZNF410Q86VK4 478 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 REXO1Q8N1G1 1221 aaKnown RBP19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 PJA1Q8NG27 643 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 STAMQ92783 540 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 SLC5A5Q92911 643 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 RXFP1Q9HBX9 757 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 SLC2A4RGQ9NR83 387 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 SUCLA2Q9P2R7 463 aaPredicted RBP19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
UBE2D4-209ENST00000454428 GLUD1P00367 558 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 SPATA31D3P0C874 917 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 LAMP2P13473 410 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 SPATA31D4Q6ZUB0 917 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 CATSPER4Q7RTX7 472 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 RHPN2Q8IUC4 686 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 URGCPQ8TCY9 931 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 RIT2Q99578 217 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 RPP25Q9BUL9 199 aaKnown RBP19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 RSAD1Q9HA92 442 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 AGPAT5Q9NUQ2 364 aa19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 SEPT9Q9UHD8 586 aaPredicted RBP19.33■□□□□ 0.68
UBE2D4-209ENST00000454428 MAP1BP46821 2468 aaKnown RBP19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 GOLGA8BA8MQT2 603 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 F8W810 466 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 MAFO75444 373 aaPredicted RBP19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 POMCP01189 267 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 URODP06132 367 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 ADH1AP07327 375 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 HOXA11P31270 313 aaPredicted RBP19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 ADD1P35611 737 aaKnown RBP19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 STARD6P59095 220 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 DCLRE1AQ6PJP8 1040 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 B3GNT9Q6UX72 402 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 PGBD4Q96DM1 585 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 INO80BQ9C086 356 aaPredicted RBP19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 NT5C3AQ9H0P0 336 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 NUMBLQ9Y6R0 609 aa19.32■□□□□ 0.68
UBE2D4-209ENST00000454428 CHD8Q9HCK8 2581 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 GAS7O60861 476 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 PSMD10O75832 226 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 SFNP31947 248 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 JAK3P52333 1124 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 XKR3Q5GH77 459 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 COLGALT2Q8IYK4 626 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 NLRP4Q96MN2 994 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 ESYT1Q9BSJ8 1104 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 MINDY3Q9H8M7 445 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 C6orf50Q9HD87 102 aa19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 PRG3Q9Y2Y8 225 aaPredicted RBP19.31■□□□□ 0.68
UBE2D4-209ENST00000454428 CNTNAP2Q9UHC6 1331 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 KLF18A0A0U1RQI7 1052 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 DNM2P50570 870 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 DSG1Q02413 1049 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 GET4Q7L5D6 327 aaPredicted RBP19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 B3GALT6Q96L58 329 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 DDX23Q9BUQ8 820 aaKnown RBP19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 KANSL3Q9P2N6 904 aa19.3■□□□□ 0.68
UBE2D4-209ENST00000454428 TGM5O43548 720 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 GLUD2P49448 558 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms