RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CCDC127Q96BQ5 260 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 ANAPC16Q96DE5 110 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 BTBD6Q96KE9 485 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 BARD1Q99728 777 aaKnown RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 CFHR5Q9BXR6 569 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 NIF3L1Q9GZT8 377 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 SNX25Q9H3E2 840 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 C8orf33Q9H7E9 229 aaPredicted RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 NCOA5Q9HCD5 579 aaKnown RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 C12orf4Q9NQ89 552 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 SH2B1Q9NRF2 756 aaPredicted RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 KLC4Q9NSK0 619 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 TEKT2Q9UIF3 430 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF215Q9UL58 517 aaPredicted RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 HPCAL4Q9UM19 191 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 AGTPBP1Q9UPW5 1226 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 FAM50BQ9Y247 325 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 C15orf41Q9Y2V0 281 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 RTCBQ9Y3I0 505 aaKnown RBP5.35□□□□□ -1.55
EPHA3-202ENST00000452448 TSC22D4Q9Y3Q8 395 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 HEY1Q9Y5J3 304 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF518AQ6AHZ1 1483 aa5.35□□□□□ -1.55
EPHA3-202ENST00000452448 A2ML1A8K2U0 1454 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 SYNJ2BP-COX16A0A087WUM0 186 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 PPEF1O14829 653 aaPredicted RBP5.34□□□□□ -1.55
EPHA3-202ENST00000452448 SULT1B1O43704 296 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 LCA5LO95447 670 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 POU2F1P14859 743 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 RPS2P15880 293 aaKnown RBP5.34□□□□□ -1.55
EPHA3-202ENST00000452448 SLC8A1P32418 973 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 RXRGP48443 463 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 THOP1P52888 689 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 PTPN5P54829 565 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 POLR2GP62487 172 aaKnown RBP eCLIP5.34□□□□□ -1.55
EPHA3-202ENST00000452448 BEX3Q00994 111 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 PPP2R3AQ06190 1150 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 FBXO43Q4G163 708 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 TJAP1Q5JTD0 557 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 SIGIRRQ6IA17 410 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 FAM196AQ6ZSG2 479 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 DNAJB7Q7Z6W7 309 aaPredicted RBP5.34□□□□□ -1.55
EPHA3-202ENST00000452448 FAM83AQ86UY5 434 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 VPS36Q86VN1 386 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 GALNT13Q8IUC8 556 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
EPHA3-202ENST00000452448 XAGE2Q96GT9 111 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 AIFM2Q9BRQ8 373 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 SNX8Q9Y5X2 465 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 ZNF521Q96K83 1311 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 MLH3Q9UHC1 1453 aa5.34□□□□□ -1.55
EPHA3-202ENST00000452448 PSDA5PKW4 1024 aaPredicted RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 OR6C65A6NJZ3 312 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 TRIM75PA6NK02 468 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 KIF28PB7ZC32 967 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 MYO1FO00160 1098 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 APAF1O14727 1248 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 MAPK13O15264 365 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 RNF113AO15541 343 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 SLC7A4O43246 635 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 SIN3BO75182 1162 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 LTA4HP09960 611 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 HSPA6P17066 643 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 CTRB1P17538 263 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 ATP4AP20648 1035 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 CAPN3P20807 821 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 TKTP29401 623 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 POLR2BP30876 1174 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 SULT1E1P49888 294 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 MAP3K7CLP57077 242 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 TGFB2P61812 414 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 PDE1BQ01064 536 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 NR5A1Q13285 461 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 RFTN1Q14699 578 aaPredicted RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 MOGQ16653 247 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 P3H1Q32P28 736 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 FAM102BQ5T8I3 360 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 NDUFAF5Q5TEU4 345 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 CTRB2Q6GPI1 263 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 LIN54Q6MZP7 749 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 CAVIN1Q6NZI2 390 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 CYB5D1Q6P9G0 228 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 POTEAQ6S8J7 498 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 APLFQ8IW19 511 aaPredicted RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 TRIM22Q8IYM9 498 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 MAGEB6Q8N7X4 407 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 SCAIQ8N9R8 606 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 PPFIBP2Q8ND30 876 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 PIP4K2CQ8TBX8 421 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 RASGRP4Q8TDF6 673 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 SHC3Q92529 594 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 KCTD12Q96CX2 325 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 ACSBG1Q96GR2 724 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 EGLN2Q96KS0 407 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 JAKMIP1Q96N16 626 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 RUNDC3BQ96NL0 473 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 HINFPQ9BQA5 517 aa5.34□□□□□ -1.56
EPHA3-202ENST00000452448 GPATCH1Q9BRR8 931 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 LLPHQ9BRT6 129 aaKnown RBP5.34□□□□□ -1.56
EPHA3-202ENST00000452448 GBA3Q9H227 469 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms