RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
HMGB2-203ENST00000446922 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
HMGB2-203ENST00000446922 TMEM169Q96HH4 297 aa17.31■□□□□ 0.36
HMGB2-203ENST00000446922 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
HMGB2-203ENST00000446922 WNT7AO00755 349 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 INPPL1O15357 1258 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■□□□ 12.1
HMGB2-203ENST00000446922 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
HMGB2-203ENST00000446922 PDIA5Q14554 519 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 RABEP1Q15276 862 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 DDX53Q86TM3 631 aaKnown RBP17.3■□□□□ 0.36
HMGB2-203ENST00000446922 CATSPER3Q86XQ3 398 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 KHSRPQ92945 711 aaKnown RBP eCLIP17.3■□□□□ 0.365e-9■□□□□ 9.7
HMGB2-203ENST00000446922 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 TBC1D13Q9NVG8 400 aa17.3■□□□□ 0.36
HMGB2-203ENST00000446922 NOL7Q9UMY1 257 aaKnown RBP17.3■□□□□ 0.36
HMGB2-203ENST00000446922 PER2O15055 1255 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 DCXO43602 365 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 CSPG5O95196 566 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 ALDH2P05091 517 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 GALTP07902 379 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
HMGB2-203ENST00000446922 CLUL1Q15846 466 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 PLPP4Q5VZY2 271 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 PIGOQ8TEQ8 1089 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 CASP10Q92851 521 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 LPPQ93052 612 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 IGSF21Q96ID5 467 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
HMGB2-203ENST00000446922 ARID2Q68CP9 1835 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 C2orf71A6NGG8 1288 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 POTEMA6NI47 508 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 PRR33A8MZF0 331 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 ST18O60284 1047 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 ZC3H11AO75152 810 aaKnown RBP eCLIP17.28■□□□□ 0.36
HMGB2-203ENST00000446922 CXCL14O95715 111 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 TECP42680 631 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■□□□□ 9.7
HMGB2-203ENST00000446922 FOSBP53539 338 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 CAPSQ13938 189 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 HACE1Q8IYU2 909 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 SUSD6Q92537 303 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 PRIMPOLQ96LW4 560 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 PHF7Q9BWX1 381 aaPredicted RBP17.28■□□□□ 0.36
HMGB2-203ENST00000446922 CSRNP2Q9H175 543 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
HMGB2-203ENST00000446922 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
HMGB2-203ENST00000446922 C5orf42Q9H799 3197 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 HIDE1A8MVS5 230 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 LOC730098B7Z3J9 87 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 LAD1O00515 517 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 TSPAN1O60635 241 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 CTSAP10619 480 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 ITGA4P13612 1032 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 GLRA2P23416 452 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 PBX3P40426 434 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 ZNF174Q15697 407 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 AMHR2Q16671 573 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 ANKRD54Q6NXT1 300 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 C4orf32Q8N8J7 132 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 RAB34Q9BZG1 259 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 S1PR5Q9H228 398 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 BMP2KQ9NSY1 1161 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 GIT1Q9Y2X7 761 aa17.27■□□□□ 0.36
HMGB2-203ENST00000446922 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-203ENST00000446922 A0A1B0GUA9 196 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 NT5C1B-RDH14C9J2C7 533 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 MED24O75448 989 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 MCM2P49736 904 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 ITIH3Q06033 890 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 PPFIBP1Q86W92 1011 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 SMG8Q8ND04 991 aaKnown RBP17.26■□□□□ 0.35
HMGB2-203ENST00000446922 VN1R2Q8NFZ6 395 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 ASAP3Q8TDY4 903 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 C2orf40Q9H1Z8 148 aa17.26■□□□□ 0.35
HMGB2-203ENST00000446922 C11orf16Q9NQ32 467 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms