RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 GBP3Q9H0R5 595 aa23.15■■□□□ 1.3
CPNE1-219ENST00000440240 WDFY4Q6ZS81 3184 aa23.14■■□□□ 1.3
CPNE1-219ENST00000440240 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.29
CPNE1-219ENST00000440240 MTHFRP42898 656 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 NHLH1Q02575 133 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 NCBP1Q09161 790 aaKnown RBP23.14■■□□□ 1.29
CPNE1-219ENST00000440240 NR5A1Q13285 461 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 CTTNQ14247 550 aaKnown RBP23.14■■□□□ 1.29
CPNE1-219ENST00000440240 PTPN21Q16825 1174 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 ALYREFQ86V81 257 aaKnown RBP23.14■■□□□ 1.29
CPNE1-219ENST00000440240 RIPOR3Q96MK2 946 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 FAM193BQ96PV7 902 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-219ENST00000440240 MTRQ99707 1265 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 PRRX2Q99811 253 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 MINDY3Q9H8M7 445 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 RSAD1Q9HA92 442 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 UBN1Q9NPG3 1134 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 DZANK1Q9NVP4 752 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 DNAJB4Q9UDY4 337 aa23.14■■□□□ 1.29
CPNE1-219ENST00000440240 ZDBF2Q9HCK1 2354 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 EIF5BO60841 1220 aaKnown RBP23.13■■□□□ 1.29
CPNE1-219ENST00000440240 DTNBO60941 627 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 ERLIN2O94905 339 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 SLC11A1P49279 550 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 CYP4A11Q02928 519 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 ZBTB33Q86T24 672 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 PPFIBP1Q86W92 1011 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 ZNF280BQ86YH2 543 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 FBXL6Q8N531 539 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 AUTS2Q8WXX7 1259 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 HSD17B14Q9BPX1 270 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 TMEM175Q9BSA9 504 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 TSHZ2Q9NRE2 1034 aa23.13■■□□□ 1.29
CPNE1-219ENST00000440240 BMP2KQ9NSY1 1161 aaPredicted RBP23.13■■□□□ 1.29
CPNE1-219ENST00000440240 ZBTB39O15060 712 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
CPNE1-219ENST00000440240 AXLP30530 894 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 ATAT1Q5SQI0 421 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 UBXN11Q5T124 520 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 NECAB1Q8N987 351 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 TNFRSF25Q93038 417 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 EIF2AK1Q9BQI3 630 aaKnown RBP23.12■■□□□ 1.29
CPNE1-219ENST00000440240 FAN1Q9Y2M0 1017 aa23.12■■□□□ 1.29
CPNE1-219ENST00000440240 FAM205CA6NFA0 338 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 DDHD2O94830 711 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 LYPLA2O95372 231 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 PTENP60484 403 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 POU5F1BQ06416 359 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 TFDP1Q14186 410 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 CALCRLQ16602 461 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 ME3Q16798 604 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 SLC22A17Q8WUG5 538 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 BCL7CQ8WUZ0 217 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-219ENST00000440240 GTF3C6Q969F1 213 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 EMILIN2Q9BXX0 1053 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 POMKQ9H5K3 350 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 ANKEF1Q9NU02 776 aa23.11■■□□□ 1.29
CPNE1-219ENST00000440240 DGAT1O75907 488 aa23.1■■□□□ 1.29
CPNE1-219ENST00000440240 ITGA4P13612 1032 aa23.1■■□□□ 1.29
CPNE1-219ENST00000440240 SP100P23497 879 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-219ENST00000440240 TRIM29Q14134 588 aa23.1■■□□□ 1.29
CPNE1-219ENST00000440240 RARS2Q5T160 578 aaKnown RBP23.1■■□□□ 1.29
CPNE1-219ENST00000440240 CCDC51Q96ER9 411 aa23.1■■□□□ 1.29
CPNE1-219ENST00000440240 ASIC4Q96FT7 647 aa23.1■■□□□ 1.29
CPNE1-219ENST00000440240 TTC12Q9H892 705 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-219ENST00000440240 BTBD18B2RXH4 712 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 POMCP01189 267 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 EPCAMP16422 314 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 MRE11P49959 708 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 AFF1P51825 1210 aaKnown RBP23.09■■□□□ 1.29
CPNE1-219ENST00000440240 PTPN14Q15678 1187 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 KIAA1841Q6NSI8 718 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 NOTUMQ6P988 496 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 CABP7Q86V35 215 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 IFNLR1Q8IU57 520 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-219ENST00000440240 C12orf76Q8N812 135 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-219ENST00000440240 XPNPEP1Q9NQW7 623 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 CDH22Q9UJ99 828 aa23.09■■□□□ 1.29
CPNE1-219ENST00000440240 INO80B-WBP1J3KQ70 363 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 NRP1O14786 923 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 B4GALT3O60512 393 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 NEMFO60524 1076 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 TSPAN1O60635 241 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 XRCC6P12956 609 aaKnown RBP eCLIP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 KLRC2P26717 231 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 TXKP42681 527 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 DIS3L2Q8IYB7 885 aaKnown RBP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 UBALD2Q8IYN6 164 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 KREMEN2Q8NCW0 462 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 SMG8Q8ND04 991 aaKnown RBP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 CCDC43Q96MW1 224 aaKnown RBP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 VN1R3Q9BXE9 311 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 MRPL17Q9NRX2 175 aaKnown RBP23.08■■□□□ 1.29
CPNE1-219ENST00000440240 SORCS3Q9UPU3 1222 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 USTQ9Y2C2 406 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 IPPQ9Y573 584 aa23.08■■□□□ 1.29
CPNE1-219ENST00000440240 C2CD4DB7Z1M9 353 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms