RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 GCDHQ92947 438 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 LOXL4Q96JB6 756 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 FDXACB1Q9BRP7 624 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 SLC13A1Q9BZW2 595 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 MKS1Q9NXB0 559 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 DPP7Q9UHL4 492 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 PUF60Q9UHX1 559 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 EVLQ9UI08 416 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 ST6GALNAC2Q9UJ37 374 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 RBM8AQ9Y5S9 174 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 MRFAP1Q9Y605 127 aa4.94□□□□□ -1.62
TRAPPC13-204ENST00000438419 PMS2P1A4D2B8 440 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 CDC14BO60729 498 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 MTNR1BP49286 362 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 GAREM2Q75VX8 874 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 PLA2G15Q8NCC3 412 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 Q8TCH9 128 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 FUBP3Q96I24 572 aaKnown RBP eCLIP4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 FAXDC2Q96IV6 333 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 UIMC1Q96RL1 719 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 GPHA2Q96T91 129 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 PLA2G12BQ9BX93 195 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 C12orf65Q9H3J6 166 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 C14orf93Q9H972 538 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 IFT122Q9HBG6 1241 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 ZFR2Q9UPR6 939 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 GPR45Q9Y5Y3 372 aa4.93□□□□□ -1.62
TRAPPC13-204ENST00000438419 SLC26A4O43511 780 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 GAAP10253 952 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 AGXTP21549 392 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 MAGEA10P43363 369 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 CD69Q07108 199 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 MGAT5Q09328 741 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 TCIRG1Q13488 830 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 CLUL1Q15846 466 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 PTPN21Q16825 1174 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 PLEKHG6Q3KR16 790 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 GJC2Q5T442 439 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 MBNL2Q5VZF2 373 aaKnown RBP4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 FUKQ8N0W3 1084 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 TTC9BQ8N6N2 239 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 GIMAP8Q8ND71 665 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 TSPEARQ8WU66 669 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 RABGGTAQ92696 567 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 FATE1Q969F0 183 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 CHMP4CQ96CF2 233 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 SLC6A15Q9H2J7 730 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 ZNF277Q9NRM2 450 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 ZBTB21Q9ULJ3 1066 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 TNKSO95271 1327 aa4.92□□□□□ -1.62
TRAPPC13-204ENST00000438419 A0A1W2PR48 441 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 KLHL33A6NCF5 533 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 OVOL3O00110 214 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 FZD9O00144 591 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 MTSS1O43312 755 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ZNF623O75123 536 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ALDH1L1O75891 902 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 RAD17O75943 681 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 LY86O95711 162 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 S100BP04271 92 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 NEK2P51955 445 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 BPIFB4P59827 614 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 CDK17Q00537 523 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 SPATS1Q496A3 300 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 GAGE13Q4V321 117 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 BTNL9Q6UXG8 535 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 Q6ZSN1 163 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ADGRE4PQ86SQ3 457 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ZBTB46Q86UZ6 589 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 PNMA8AQ86V59 439 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 PIK3C3Q8NEB9 887 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 SHCBP1Q8NEM2 672 aa4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 RPL10LQ96L21 214 aaKnown RBP4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 ACE2Q9BYF1 805 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC13-204ENST00000438419 XPOTO43592 962 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 TOX4O94842 621 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 JUNP05412 331 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 LTA4HP09960 611 aaKnown RBP4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 OSMP13725 252 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 CCND1P24385 295 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 ADAM17P78536 824 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 FOXL1Q12952 345 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 RIN1Q13671 783 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 ACAP2Q15057 778 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 CDSNQ15517 529 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 ODR4Q5SWX8 454 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 FAM180AQ6UWF9 173 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 OR14A2Q96R54 314 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 C1QTNF3Q9BXJ4 246 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 SLC30A1Q9Y6M5 507 aa4.9□□□□□ -1.62
TRAPPC13-204ENST00000438419 NRP1O14786 923 aa4.89□□□□□ -1.63
TRAPPC13-204ENST00000438419 ALDH1A2O94788 518 aa4.89□□□□□ -1.63
TRAPPC13-204ENST00000438419 SNUPNO95149 360 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-204ENST00000438419 ADRB1P08588 477 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms