RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 EIF2AQ9BY44 585 aaKnown RBP25.29■■□□□ 1.64
HOMER3-203ENST00000433218 TTC12Q9H892 705 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-203ENST00000433218 DDHD2O94830 711 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 WEE2P0C1S8 567 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 TXKP42681 527 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 CDC42EP1Q00587 391 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 CAPSQ13938 189 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 SMC1AQ14683 1233 aaKnown RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 CBX2Q14781 532 aaPredicted RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 GLB1LQ6UWU2 654 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 TMEM184AQ6ZMB5 413 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 CCDC83Q8IWF9 413 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 VPS52Q8N1B4 723 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 SMG8Q8ND04 991 aaKnown RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 PIGOQ8TEQ8 1089 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 MTMR9Q96QG7 549 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 NAP1L4Q99733 375 aaKnown RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 HSD17B14Q9BPX1 270 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 INO80BQ9C086 356 aaPredicted RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 BRMS1Q9HCU9 246 aa25.28■■□□□ 1.64
HOMER3-203ENST00000433218 NGRNQ9NPE2 291 aaKnown RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 SH2B1Q9NRF2 756 aaPredicted RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 PUF60Q9UHX1 559 aaKnown RBP25.28■■□□□ 1.64
HOMER3-203ENST00000433218 PIEZO1Q92508 2521 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 DOCK6Q96HP0 2047 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 MTCL1Q9Y4B5 1905 aaKnown RBP25.27■■□□□ 1.64
HOMER3-203ENST00000433218 TSPAN1O60635 241 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 CLASP2O75122 1294 aaKnown RBP25.27■■□□□ 1.64
HOMER3-203ENST00000433218 ZNF623O75123 536 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 GALTP07902 379 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 ATP2B1P20020 1258 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 KRT17Q04695 432 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 MRPL43Q8N983 215 aaKnown RBP25.27■■□□□ 1.64
HOMER3-203ENST00000433218 TMEM169Q96HH4 297 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 IGSF21Q96ID5 467 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 PHF7Q9BWX1 381 aaPredicted RBP25.27■■□□□ 1.64
HOMER3-203ENST00000433218 RNF39Q9H2S5 420 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 HES2Q9Y543 173 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 VPS13AQ96RL7 3174 aa25.27■■□□□ 1.64
HOMER3-203ENST00000433218 VWA8A3KMH1 1905 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.26■■□□□ 1.63
HOMER3-203ENST00000433218 F8W810 466 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 DKC1O60832 514 aaKnown RBP eCLIP25.26■■□□□ 1.63
HOMER3-203ENST00000433218 ALDH7A1P49419 539 aaKnown RBP25.26■■□□□ 1.63
HOMER3-203ENST00000433218 RAB27AP51159 221 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 SRGAP1Q7Z6B7 1085 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 CDR2LQ86X02 465 aaPredicted RBP25.26■■□□□ 1.63
HOMER3-203ENST00000433218 GPRC5CQ9NQ84 441 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 PCDHA12Q9UN75 941 aa25.26■■□□□ 1.63
HOMER3-203ENST00000433218 BAG4O95429 457 aaKnown RBP25.25■■□□□ 1.63
HOMER3-203ENST00000433218 POMCP01189 267 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 EPCAMP16422 314 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 RARRES1P49788 294 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 AMHR2Q16671 573 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 C12orf76Q8N812 135 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-203ENST00000433218 RSAD1Q9HA92 442 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 PPME1Q9Y570 386 aa25.25■■□□□ 1.63
HOMER3-203ENST00000433218 B4GALT5O43286 388 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 USO1O60763 962 aaKnown RBP25.24■■□□□ 1.63
HOMER3-203ENST00000433218 CD2BP2O95400 341 aaKnown RBP25.24■■□□□ 1.63
HOMER3-203ENST00000433218 GLRA2P23416 452 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 MCM7P33993 719 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 PTENP60484 403 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 RNASELQ05823 741 aaKnown RBP25.24■■□□□ 1.63
HOMER3-203ENST00000433218 MBTD1Q05BQ5 628 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 MRPL10Q7Z7H8 261 aaKnown RBP25.24■■□□□ 1.63
HOMER3-203ENST00000433218 POMKQ9H5K3 350 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 IPPQ9Y573 584 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 DOCK8Q8NF50 2099 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 MYH11P35749 1972 aa25.24■■□□□ 1.63
HOMER3-203ENST00000433218 MED24O75448 989 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 LYPLA2O95372 231 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 SSBP05455 408 aaKnown RBP eCLIP25.23■■□□□ 1.63
HOMER3-203ENST00000433218 SPATA31C1P0DKV0 1188 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 OTUD6AQ7L8S5 288 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 TCP11Q8WWU5 503 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 NXF3Q9H4D5 531 aaKnown RBP25.23■■□□□ 1.63
HOMER3-203ENST00000433218 MARCH5Q9NX47 278 aa25.23■■□□□ 1.63
HOMER3-203ENST00000433218 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
HOMER3-203ENST00000433218 CXCL14O95715 111 aa25.22■■□□□ 1.63
HOMER3-203ENST00000433218 NBR1Q14596 966 aa25.22■■□□□ 1.63
HOMER3-203ENST00000433218 PTPN14Q15678 1187 aa25.22■■□□□ 1.63
HOMER3-203ENST00000433218 DDX53Q86TM3 631 aaKnown RBP25.22■■□□□ 1.63
HOMER3-203ENST00000433218 ZFP42Q96MM3 310 aa25.22■■□□□ 1.63
HOMER3-203ENST00000433218 POLR3FQ9H1D9 316 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-203ENST00000433218 INO80B-WBP1J3KQ70 363 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 ERLIN2O94905 339 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 CTSAP10619 480 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 SKIP12755 728 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 ARL2P36404 184 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 MLH1P40692 756 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 POTEGQ6S5H5 508 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 MAEAQ7L5Y9 396 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 EDAQ92838 391 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 APOL6Q9BWW8 343 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 MIOSQ9NXC5 875 aa25.21■■□□□ 1.63
HOMER3-203ENST00000433218 FSD2A1L4K1 749 aa25.2■■□□□ 1.63
HOMER3-203ENST00000433218 TTLL13PA6NNM8 815 aa25.2■■□□□ 1.63
HOMER3-203ENST00000433218 ARF4P18085 180 aaPredicted RBP25.2■■□□□ 1.63
HOMER3-203ENST00000433218 NCLP19338 710 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms