RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CCT6BQ92526 530 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ZKSCAN3Q9BRR0 538 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 RIOK1Q9BRS2 568 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CNOT10Q9H9A5 744 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 EPB41L5Q9HCM4 733 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 NEUROD4Q9HD90 331 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CNNM1Q9NRU3 951 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 LUZP4Q9P127 313 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SEPT3Q9UH03 358 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ZNF804BA4D1E1 1349 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 A0A1B0GUA9 196 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 GOLGA6L10A6NI86 522 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 GCOM1H8Y6P7 765 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 DNM1LO00429 736 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PPIP5K2O43314 1243 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PRDM1O75626 825 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 TCEA3O75764 348 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PLEKP08567 350 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 MYZAPP0CAP1 466 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 EZRP15311 586 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ANXA13P27216 316 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 KLK7P49862 253 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SEC24CP53992 1094 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 GUCY2DQ02846 1103 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 MCL1Q07820 350 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 IFT88Q13099 833 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 RAB33AQ14088 237 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CST9Q5W186 159 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 KCTD16Q68DU8 428 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 KIF6Q6ZMV9 814 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 HS2ST1Q7LGA3 356 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 BLIDQ8IZY5 108 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 NDUFAF2Q8N183 169 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 GUF1Q8N442 669 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ANKS1AQ92625 1134 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CITED4Q96RK1 184 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PRR14Q9BWN1 585 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 MOV10L1Q9BXT6 1211 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CCDC134Q9H6E4 229 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PCDHA4Q9UN74 947 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 LEMD3Q9Y2U8 911 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ERVV-1B6SEH8 477 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 E7EVH7 732 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 CCDC188H7C350 402 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 AKR1B10O60218 316 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SERPING1P05155 500 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 ALADP13716 330 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 MCM7P33993 719 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 MTIF2P46199 727 aaKnown RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SCTRP47872 440 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 EIF3BP55884 814 aaKnown RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 NLRP5P59047 1200 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 PPP2R2AP63151 447 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 IRX1P78414 480 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 STK4Q13043 487 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 NR1H3Q13133 447 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 ITIH4Q14624 930 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 UAP1Q16222 522 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SKIDA1Q1XH10 827 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 TTC19Q6DKK2 380 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-202ENST00000432306 RELL1Q8IUW5 271 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 LRRC15Q8TF66 581 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SKA1Q96BD8 255 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 TLCD1Q96CP7 247 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SEC16BQ96JE7 1060 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 CDHR1Q96JP9 859 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 PBKQ96KB5 322 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 CCDC114Q96M63 670 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 RIC8AQ9NPQ8 531 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 CEP72Q9P209 647 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 SLC12A4Q9UP95 1085 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 MAPK8IP1Q9UQF2 711 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 PLAAQ9Y263 795 aa8.73□□□□□ -1.01
VTI1A-202ENST00000432306 ANKRD36CQ5JPF3 1778 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 CFAP73A6NFT4 308 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 LRRC53A6NM62 1247 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 EPHB6O15197 1021 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 CNGA1P29973 690 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 HSD17B3P37058 310 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 UBA7P41226 1012 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 EPS15P42566 896 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 PPM1FP49593 454 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-202ENST00000432306 SCNN1DP51172 638 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 ZNF844Q08AG5 666 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 SLC18A3Q16572 532 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 SLC9C1Q4G0N8 1177 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 LRRC55Q6ZSA7 311 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 ANKS3Q6ZW76 656 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 SAPCD2Q86UD0 394 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 CACNA2D3Q8IZS8 1091 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 LILRB2Q8N423 598 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 RASGEF1CQ8N431 466 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 KIAA0895Q8NCT3 520 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 N4BP2L2Q92802 583 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms