RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ATP2B1P20020 1258 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 ARL2P36404 184 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 ALDH7A1P49419 539 aaKnown RBP19.06■□□□□ 0.64
CPSF4-203ENST00000430038 PTENP60484 403 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 CAPSQ13938 189 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 VPS52Q8N1B4 723 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 RPGRIP1Q96KN7 1286 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 MTRQ99707 1265 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 PHF7Q9BWX1 381 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-203ENST00000430038 MRPL9Q9BYD2 267 aaKnown RBP19.06■□□□□ 0.64
CPSF4-203ENST00000430038 GBP3Q9H0R5 595 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 ZBP1Q9H171 429 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 HES2Q9Y543 173 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 PPME1Q9Y570 386 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 HCFC2Q9Y5Z7 792 aa19.06■□□□□ 0.64
CPSF4-203ENST00000430038 TSPAN1O60635 241 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 MED24O75448 989 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 GLRA2P23416 452 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 MCM7P33993 719 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 RARRES1P49788 294 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 GLB1LQ6UWU2 654 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 HFE2Q6ZVN8 426 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 POP1Q99575 1024 aaKnown RBP19.05■□□□□ 0.64
CPSF4-203ENST00000430038 BRMS1Q9HCU9 246 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 GPRC5CQ9NQ84 441 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 ANKEF1Q9NU02 776 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 LIMCH1Q9UPQ0 1083 aa19.05■□□□□ 0.64
CPSF4-203ENST00000430038 ASAP2O43150 1006 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 B4GALT5O43286 388 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 POMCP01189 267 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 WEE2P0C1S8 567 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 SKIP12755 728 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 RAB27AP51159 221 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 MBTD1Q05BQ5 628 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 SMC1AQ14683 1233 aaKnown RBP19.04■□□□□ 0.64
CPSF4-203ENST00000430038 ZNF174Q15697 407 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 C8orf34Q49A92 452 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 DDX53Q86TM3 631 aaKnown RBP19.04■□□□□ 0.64
CPSF4-203ENST00000430038 CDR2LQ86X02 465 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-203ENST00000430038 CATSPER3Q86XQ3 398 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 IFNLR1Q8IU57 520 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-203ENST00000430038 C12orf76Q8N812 135 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-203ENST00000430038 TCP11Q8WWU5 503 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 IPPQ9Y573 584 aa19.04■□□□□ 0.64
CPSF4-203ENST00000430038 C2orf16Q68DN1 1984 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 TTLL13PA6NNM8 815 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 F8W810 466 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 EPCAMP16422 314 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 NCLP19338 710 aaKnown RBP19.03■□□□□ 0.64
CPSF4-203ENST00000430038 SP100P23497 879 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-203ENST00000430038 NBR1Q14596 966 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 ECM1Q16610 540 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 TAS1R1Q7RTX1 841 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 EXOC8Q8IYI6 725 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 C4orf32Q8N8J7 132 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 SLC22A17Q8WUG5 538 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 EDAQ92838 391 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 TMEM169Q96HH4 297 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 RSAD1Q9HA92 442 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 PLXNA3P51805 1871 aa19.03■□□□□ 0.64
CPSF4-203ENST00000430038 GAS2O43903 313 aaKnown RBP19.02■□□□□ 0.64
CPSF4-203ENST00000430038 LILRB3O75022 631 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 CTSAP10619 480 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 ARF4P18085 180 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-203ENST00000430038 RNASELQ05823 741 aaKnown RBP19.02■□□□□ 0.64
CPSF4-203ENST00000430038 MAEAQ7L5Y9 396 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 PGBD4Q96DM1 585 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 FAM122AQ96E09 287 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 POLD4Q9HCU8 107 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 USP20Q9Y2K6 914 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 IRAK3Q9Y616 596 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 TRIP11Q15643 1979 aa19.02■□□□□ 0.64
CPSF4-203ENST00000430038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-203ENST00000430038 INO80B-WBP1J3KQ70 363 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 NRP1O14786 923 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 USO1O60763 962 aaKnown RBP19.01■□□□□ 0.63
CPSF4-203ENST00000430038 DGAT1O75907 488 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 EFEMP2O95967 443 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 POU5F1BQ06416 359 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 TRIM29Q14134 588 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 MXD4Q14582 209 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-203ENST00000430038 GSTCDQ8NEC7 633 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 BSNDQ8WZ55 320 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 ZFP42Q96MM3 310 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 GAD1Q99259 594 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 POLR3FQ9H1D9 316 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-203ENST00000430038 CXCL16Q9H2A7 254 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 POMKQ9H5K3 350 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 MARCH5Q9NX47 278 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 HCN4Q9Y3Q4 1203 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 ARIH1Q9Y4X5 557 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-203ENST00000430038 ZDBF2Q9HCK1 2354 aa19.01■□□□□ 0.63
CPSF4-203ENST00000430038 EDN1P05305 212 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 CA8P35219 290 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 ZXDAP98168 799 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 PTPN14Q15678 1187 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 POTEGQ6S5H5 508 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 COLGALT2Q8IYK4 626 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 FBXO18Q8NFZ0 1043 aa19■□□□□ 0.63
CPSF4-203ENST00000430038 C8orf76Q96K31 380 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms