RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 FKBP15Q5T1M5 1219 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 SLFN12LQ6IEE8 588 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 KIAA0907Q7Z7F0 614 aaPredicted RBP6.64□□□□□ -1.35
LINC00458-202ENST00000427299 PLA2G15Q8NCC3 412 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 PTCH2Q9Y6C5 1203 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 SBNO2Q9Y2G9 1366 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 DAPK1P53355 1430 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 ADGRL2O95490 1459 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 RPRD2Q5VT52 1461 aaKnown RBP6.64□□□□□ -1.35
LINC00458-202ENST00000427299 TEX14Q8IWB6 1497 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 MAGI1Q96QZ7 1491 aaPredicted RBP6.64□□□□□ -1.35
LINC00458-202ENST00000427299 GRXCR1A8MXD5 290 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 E9PCH4 1651 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 KDM6BO15054 1643 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 ARHGAP44Q17R89 818 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 MBNL2Q5VZF2 373 aaKnown RBP6.63□□□□□ -1.35
LINC00458-202ENST00000427299 MFSD5Q6N075 450 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 ELOA2Q8IYF1 753 aaPredicted RBP6.63□□□□□ -1.35
LINC00458-202ENST00000427299 VOPP1Q96AW1 172 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 WDR92Q96MX6 357 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 MNTQ99583 582 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 KIAA0586Q9BVV6 1533 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 KDM5DQ9BY66 1539 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 POLR3BQ9NW08 1133 aaPredicted RBP6.63□□□□□ -1.35
LINC00458-202ENST00000427299 FANCLQ9NW38 375 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 ARHGEF12Q9NZN5 1544 aa6.63□□□□□ -1.35
LINC00458-202ENST00000427299 CAMSAP2Q08AD1 1489 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 GRIN2AQ12879 1464 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 PTPRKQ15262 1439 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 GCP02774 474 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 KIF11P52732 1056 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 BMP8AQ7Z5Y6 402 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 ZNF276Q8N554 614 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 ZSWIM2Q8NEG5 633 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 MDGA1Q8NFP4 955 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
LINC00458-202ENST00000427299 APPBP2Q92624 585 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 ZNF512Q96ME7 567 aaPredicted RBP6.62□□□□□ -1.35
LINC00458-202ENST00000427299 RCAN3Q9UKA8 241 aa6.62□□□□□ -1.35
LINC00458-202ENST00000427299 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 UBA6A0AVT1 1052 aaPredicted RBP6.61□□□□□ -1.35
LINC00458-202ENST00000427299 GOLGA6L6A8MZA4 724 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 CDC45O75419 566 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 KRT37O76014 449 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 JUNP05412 331 aaKnown RBP6.61□□□□□ -1.35
LINC00458-202ENST00000427299 NR4A1P22736 598 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 NAIF1Q69YI7 327 aaPredicted RBP6.61□□□□□ -1.35
LINC00458-202ENST00000427299 C16orf86Q6ZW13 317 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 VRK3Q8IV63 474 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 MB21D1Q8N884 522 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 PGBD4Q96DM1 585 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 LAMC1P11047 1609 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 PREX2Q70Z35 1606 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 KDM5CP41229 1560 aa6.61□□□□□ -1.35
LINC00458-202ENST00000427299 MBD5Q9P267 1494 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 NCOA1Q15788 1441 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 M0R2C6 588 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 PPM1GO15355 546 aaPredicted RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 IPO13O94829 963 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 FBLP22087 321 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 DDX10Q13206 875 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 TTC38Q5R3I4 469 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 KRT40Q6A162 431 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 SYNPOQ8N3V7 929 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 GPR150Q8NGU9 434 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 C16orf92Q96LL3 132 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 NCOA5Q9HCD5 579 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 DNAI1Q9UI46 699 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 FZD1Q9UP38 647 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 EIF2AK4Q9P2K8 1649 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 ARHGEF5Q12774 1597 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 DISP1Q96F81 1524 aa6.6□□□□□ -1.35
LINC00458-202ENST00000427299 NUP153P49790 1475 aaKnown RBP6.6□□□□□ -1.35
LINC00458-202ENST00000427299 TROQ12816 1431 aaPredicted RBP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 MYO5CQ9NQX4 1742 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 MFAP3LO75121 409 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 HNRNPLP14866 589 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 HNRNPA0Q13151 305 aaKnown RBP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 TKFCQ3LXA3 575 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 PRAMEF9Q5VWM5 478 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 ZCCHC8Q6NZY4 707 aaKnown RBP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 CHST14Q8NCH0 376 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 SIN3AQ96ST3 1273 aa6.59□□□□□ -1.35
LINC00458-202ENST00000427299 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
LINC00458-202ENST00000427299 DENND4BO75064 1496 aaPredicted RBP6.59□□□□□ -1.36
LINC00458-202ENST00000427299 CEP170Q5SW79 1584 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 MTSS1O43312 755 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 RHOBTB3O94955 611 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 LMNAP02545 664 aaKnown RBP6.58□□□□□ -1.36
LINC00458-202ENST00000427299 CYP17A1P05093 508 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 BCAR1P56945 870 aa6.58□□□□□ -1.36
LINC00458-202ENST00000427299 SPIDRQ14159 915 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms