RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 TMEM132BQ14DG7 1078 aa17.52■□□□□ 0.4
CTSB-203ENST00000420692 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
CTSB-203ENST00000420692 RFFLQ8WZ73 363 aa17.52■□□□□ 0.4
CTSB-203ENST00000420692 SEMA4DQ92854 862 aa17.52■□□□□ 0.4
CTSB-203ENST00000420692 THAP2Q9H0W7 228 aa17.52■□□□□ 0.4
CTSB-203ENST00000420692 TBX20Q9UMR3 447 aa17.52■□□□□ 0.4
CTSB-203ENST00000420692 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
CTSB-203ENST00000420692 CTDP1Q9Y5B0 961 aaPredicted RBP17.52■□□□□ 0.4
CTSB-203ENST00000420692 P4HA2O15460 535 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 FDX1P10109 184 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 DSG3P32926 999 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 ZNF746Q6NUN9 644 aaPredicted RBP17.52■□□□□ 0.39
CTSB-203ENST00000420692 LMBR1Q8WVP7 490 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 IFT81Q8WYA0 676 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 WRNIP1Q96S55 665 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 SENP7Q9BQF6 1050 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.398e-8■■■■■ 37.7
CTSB-203ENST00000420692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.398e-17■■■■■ 72.1
CTSB-203ENST00000420692 USP20Q9Y2K6 914 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 DAAM1Q9Y4D1 1078 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 PCDHA10Q9Y5I2 948 aa17.52■□□□□ 0.39
CTSB-203ENST00000420692 ARID2Q68CP9 1835 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 LCTP09848 1927 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 DDX3YO15523 660 aaKnown RBP17.51■□□□□ 0.39
CTSB-203ENST00000420692 CHRNB2P17787 502 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 RFX1P22670 979 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 ECHS1P30084 290 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 CCND2P30279 289 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 POP1Q99575 1024 aaKnown RBP17.51■□□□□ 0.39
CTSB-203ENST00000420692 PDLIM7Q9NR12 457 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 GABBR1Q9UBS5 961 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 PMM2O15305 246 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 NNTQ13423 1086 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 XRRA1Q6P2D8 792 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 MAP4K3Q8IVH8 894 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 PIK3R5Q8WYR1 880 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 C12orf42Q96LP6 360 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
CTSB-203ENST00000420692 PCDHB18PQ96TA0 734 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 NTPCRQ9BSD7 190 aaKnown RBP17.51■□□□□ 0.39
CTSB-203ENST00000420692 ACP6Q9NPH0 428 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 NR2E1Q9Y466 385 aa17.51■□□□□ 0.39
CTSB-203ENST00000420692 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 PGRMC1O00264 195 aaKnown RBP17.5■□□□□ 0.39
CTSB-203ENST00000420692 SGPL1O95470 568 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 CNGA1P29973 690 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 SNRPFP62306 86 aaKnown RBP17.5■□□□□ 0.39
CTSB-203ENST00000420692 TNNC1P63316 161 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 SNRNP35Q16560 246 aaKnown RBP17.5■□□□□ 0.39
CTSB-203ENST00000420692 NLRX1Q86UT6 975 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 IQCKQ8N0W5 287 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 PPP1R1BQ9UD71 204 aaPredicted RBP17.5■□□□□ 0.39
CTSB-203ENST00000420692 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
CTSB-203ENST00000420692 DENND3A2RUS2 1198 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ANKRD62A6NC57 917 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 CAPN2P17655 700 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ACTN2P35609 894 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 MAP2K1Q02750 393 aaPredicted RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 ANGEL2Q5VTE6 544 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 CTNNBL1Q8WYA6 563 aaPredicted RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 ELMO3Q96BJ8 720 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ARL8AQ96BM9 186 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 XPNPEP1Q9NQW7 623 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 ZNFX1Q9P2E3 1918 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 CCDC66A2RUB6 948 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 SART1O43290 800 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 CCDC172P0C7W6 258 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 MXI1P50539 228 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 PAK2Q13177 524 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ALS2CLQ60I27 953 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 SWSAP1Q6NVH7 229 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 NOP9Q86U38 636 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 FAM71AQ8IYT1 594 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ZIM3Q96PE6 472 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 ISCUQ9H1K1 167 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 NOCTQ9UK39 431 aaKnown RBP17.49■□□□□ 0.39
CTSB-203ENST00000420692 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
CTSB-203ENST00000420692 SORBS3O60504 671 aa17.48■□□□□ 0.39
CTSB-203ENST00000420692 FTLP02792 175 aaPredicted RBP17.48■□□□□ 0.39
CTSB-203ENST00000420692 ZSCAN26Q16670 478 aa17.48■□□□□ 0.39
CTSB-203ENST00000420692 CATSPERGQ6ZRH7 1159 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms