RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 TTC36A6NLP5 189 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 EPHB2P29323 1055 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 CCDC6Q16204 474 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 OR52E8Q6IFG1 317 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 SEPT14Q6ZU15 432 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 CCNJLQ8IV13 435 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 GANQ9H2C0 597 aa18.78■□□□□ 0.6
PMS1-206ENST00000418224 STX2P32856 288 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 PICALMQ13492 652 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 ARHGAP27Q6ZUM4 889 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 SYCP3Q8IZU3 236 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 U2AF1L4Q8WU68 220 aaKnown RBP18.77■□□□□ 0.6
PMS1-206ENST00000418224 OSGEPQ9NPF4 335 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 TXLNGQ9NUQ3 528 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 SUCLA2Q9P2R7 463 aaPredicted RBP18.77■□□□□ 0.6
PMS1-206ENST00000418224 HDAC9Q9UKV0 1011 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 ABLIM1O14639 778 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 KIAA0391O15091 583 aaKnown RBP18.77■□□□□ 0.6
PMS1-206ENST00000418224 ACSL3O95573 720 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 AFPP02771 609 aaKnown RBP18.77■□□□□ 0.6
PMS1-206ENST00000418224 H2AFZP0C0S5 128 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 PLCG2P16885 1265 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 SLC16A2P36021 539 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 PTENP60484 403 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 TNIP1Q15025 636 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 AADACL2Q6P093 401 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 H2AFVQ71UI9 128 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 ZNF804AQ7Z570 1209 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 C18orf8Q96DM3 657 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 CTNNAL1Q9UBT7 734 aa18.77■□□□□ 0.6
PMS1-206ENST00000418224 NVLO15381 856 aaKnown RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 ACADSP16219 412 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 SERPINB4P48594 390 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 SPDYCQ5MJ68 293 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 METTL5Q9NRN9 209 aaKnown RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.76■□□□□ 0.59
PMS1-206ENST00000418224 RIPK2O43353 540 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 RPL21P46778 160 aaKnown RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 CGB2Q6NT52 195 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 IRF2BP2Q7Z5L9 587 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 APBB1IPQ7Z5R6 666 aaPredicted RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.76■□□□□ 0.59
PMS1-206ENST00000418224 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 NMRK1Q9NWW6 199 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 MTRF1LQ9UGC7 380 aaKnown RBP18.76■□□□□ 0.59
PMS1-206ENST00000418224 PRKAG3Q9UGI9 489 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 STXBP5LQ9Y2K9 1186 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 STAT3P40763 770 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 MPP2Q14168 576 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 TTBK2Q6IQ55 1244 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 NT5C3AQ9H0P0 336 aa18.76■□□□□ 0.59
PMS1-206ENST00000418224 UCHL3P15374 230 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 ABCB4P21439 1286 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 KCNA3P22001 575 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 SETDB1Q15047 1291 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 VSTM1Q6UX27 236 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 RBBP8NLQ8NC74 664 aaPredicted RBP18.75■□□□□ 0.59
PMS1-206ENST00000418224 TBC1D10AQ9BXI6 508 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 KIAA1683Q9H0B3 1180 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 ARMCX3Q9UH62 379 aaPredicted RBP18.75■□□□□ 0.59
PMS1-206ENST00000418224 MYH4Q9Y623 1939 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 CREB3O43889 395 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 CACNA2D1P54289 1103 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 DCAF12L1Q5VU92 463 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 GBP5Q96PP8 586 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 CDCA7Q9BWT1 371 aaPredicted RBP18.75■□□□□ 0.59
PMS1-206ENST00000418224 KCTD10Q9H3F6 313 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 DENND2DQ9H6A0 471 aaPredicted RBP18.75■□□□□ 0.59
PMS1-206ENST00000418224 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 TBK1Q9UHD2 729 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 PTPN22Q9Y2R2 807 aa18.75■□□□□ 0.59
PMS1-206ENST00000418224 BTNL10A8MVZ5 291 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 ATP9AO75110 1047 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 CASP5P51878 434 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 EXOC3L4Q17RC7 722 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 CKAP2Q8WWK9 683 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 BICD1Q96G01 975 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 NAP1L3Q99457 506 aaPredicted RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 DDX50Q9BQ39 737 aaKnown RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 PITPNM3Q9BZ71 974 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 GRHL1Q9NZI5 618 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 CNOT7Q9UIV1 285 aaKnown RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 E7ENQ6 273 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 BRAFP15056 766 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 TM4SF1P30408 202 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 DYNC1I2Q13409 638 aaKnown RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 C10orf76Q5T2E6 689 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 IRGCQ6NXR0 463 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 POTEGQ6S5H5 508 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 POTEEQ6S8J3 1075 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 APLFQ8IW19 511 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms