RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 RPS2P15880 293 aaKnown RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 HDCP19113 662 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 SLC9A1P19634 815 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 NFKB1P19838 968 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 CTSSP25774 331 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 HADHAP40939 763 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 SH3BGRP55822 239 aaPredicted RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 RAC1P63000 192 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 ATP11AP98196 1134 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 AKAP17AQ02040 695 aaKnown RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 LRRC74AQ0VAA2 488 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 MRPL28Q13084 256 aaKnown RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 PPA1Q15181 289 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF174Q15697 407 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 FAM26FQ5R3K3 315 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 IRGCQ6NXR0 463 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF783Q6ZMS7 281 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 OTOP1Q7RTM1 612 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 CEP97Q8IW35 865 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 RPAP2Q8IXW5 612 aaPredicted RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 LRRC71Q8N4P6 559 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 NGEFQ8N5V2 710 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 CREB3L4Q8TEY5 395 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 C18orf8Q96DM3 657 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 UROC1Q96N76 676 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 PPP1R9BQ96SB3 815 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 HEPHQ9BQS7 1158 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 PDCD2LQ9BRP1 358 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 FSD1Q9BTV5 496 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 QRSL1Q9H0R6 528 aaKnown RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 GP6Q9HCN6 339 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 CTNNA3Q9UI47 895 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 FBXL5Q9UKA1 691 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 TARBP1Q13395 1621 aaKnown RBP6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 PASKQ96RG2 1323 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 SYNJ1O43426 1573 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 LRRC14BA6NHZ5 514 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 F8W031 263 aaPredicted RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 STXBP3O00186 592 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 AP3D1O14617 1153 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 DGKIO75912 1065 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 TPPPO94811 219 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 SRGAP2BP0DMP2 458 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 RARBP10826 455 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 ALAS1P13196 640 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 ENPP1P22413 925 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 MSX1P28360 303 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 HSPA4P34932 840 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 ADH7P40394 386 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 MCM2P49736 904 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 ALDH3A2P51648 485 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 POLR2FP61218 127 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 TFCP2Q12800 502 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 COX10Q12887 443 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 C1orf141Q5JVX7 400 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 RAB12Q6IQ22 244 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 NAA16Q6N069 864 aaPredicted RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 BTNL9Q6UXG8 535 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 VN1R5Q7Z5H4 357 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 PRPF39Q86UA1 669 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 RIOX2Q8IUF8 465 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 CISD2Q8N5K1 135 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 MARCH10Q8NA82 808 aaPredicted RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 KREMEN2Q8NCW0 462 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 TTC9Q92623 222 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 WNT2BQ93097 391 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 KIF1BPQ96EK5 621 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC43Q96MW1 224 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 MXD3Q9BW11 206 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 BOCQ9BWV1 1114 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 USP26Q9BXU7 913 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 TMEM160Q9NX00 188 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 FEM1BQ9UK73 627 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 PCDHGB4Q9UN71 923 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 DUSP12Q9UNI6 340 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 COG5Q9UP83 839 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 NR2E3Q9Y5X4 410 aa6.49□□□□□ -1.37
CBX1P3-201ENST00000413296 A0A088AWK7 358 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 A0A0B4J269 797 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 LCHNA4D1U4 455 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 DCDC2CA8MYV0 355 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 F8W8V4 182 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ELL2O00472 640 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 GSTA4O15217 222 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 IPO8O15397 1037 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SRGAP2O75044 1071 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC175P0C221 793 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 IL4RP24394 825 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 TRPC1P48995 793 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ETF1P62495 437 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 RAB1AP62820 205 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 IRX3P78415 501 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ST5P78524 1137 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms