RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ITGA4P13612 1032 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 CD302Q8IX05 232 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 RHOT2Q8IXI1 618 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 CCDC26Q8TAB7 109 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 PIK3R5Q8WYR1 880 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
NUP50-203ENST00000407019 PMM2O15305 246 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 EGFRP00533 1210 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 KRT14P02533 472 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 ECHS1P30084 290 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 TRMT1LQ7Z2T5 733 aaKnown RBP18.21■□□□□ 0.51
NUP50-203ENST00000407019 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 RDM1Q8NG50 284 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 CAPS2Q9BXY5 557 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 TAOK3Q9H2K8 898 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
NUP50-203ENST00000407019 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 VWA5AO00534 786 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 ADRB2P07550 413 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 HADHBP55084 474 aaKnown RBP18.2■□□□□ 0.5
NUP50-203ENST00000407019 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
NUP50-203ENST00000407019 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
NUP50-203ENST00000407019 CARD9Q9H257 536 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 AMACRQ9UHK6 382 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 COG5Q9UP83 839 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 USP20Q9Y2K6 914 aa18.2■□□□□ 0.5
NUP50-203ENST00000407019 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 GOLGA8JA6NMD2 632 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 CCDC169A6NNP5 214 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 PPFIA4O75335 1185 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 FGGP02679 453 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 SMTNP53814 917 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 XRRA1Q6P2D8 792 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 FOXR1Q6PIV2 292 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 ATG4CQ96DT6 458 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 TBX20Q9UMR3 447 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 PFASO15067 1338 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 FAM170AA1A519 330 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 FTLP02792 175 aaPredicted RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 RPS12P25398 132 aaKnown RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 CCND2P30279 289 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 IRAK1P51617 712 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 SKOR1P84550 965 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 DMP1Q13316 513 aaPredicted RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 SNRNP35Q16560 246 aaKnown RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 ZNF746Q6NUN9 644 aaPredicted RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 NLRX1Q86UT6 975 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 MAP4K3Q8IVH8 894 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 TMEM161BQ8NDZ6 487 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 LRRC45Q96CN5 670 aa18.19■□□□□ 0.5
NUP50-203ENST00000407019 RNPC3Q96LT9 517 aaKnown RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 NAP1L3Q99457 506 aaPredicted RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
NUP50-203ENST00000407019 ANKRD63C9JTQ0 380 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 USP8P40818 1118 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 NPTX2P47972 431 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 MCCD1P59942 119 aaPredicted RBP18.18■□□□□ 0.5
NUP50-203ENST00000407019 BAATQ14032 418 aaPredicted RBP18.18■□□□□ 0.5
NUP50-203ENST00000407019 TCEAL1Q15170 157 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 C11orf63Q6NUN7 778 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 DDX42Q86XP3 938 aaKnown RBP eCLIP18.18■□□□□ 0.5
NUP50-203ENST00000407019 CBWD2Q8IUF1 395 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 KAT5Q92993 513 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 GPRASP2Q96D09 838 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 SENP7Q9BQF6 1050 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 CTTNBP2NLQ9P2B4 639 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 TULP2O00295 520 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 TTI1O43156 1089 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 GNGT1P63211 74 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 MAP2K1Q02750 393 aaPredicted RBP18.18■□□□□ 0.5
NUP50-203ENST00000407019 PRPF4BQ13523 1007 aaKnown RBP18.18■□□□□ 0.5
NUP50-203ENST00000407019 CLUL1Q15846 466 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 ANO5Q75V66 913 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
NUP50-203ENST00000407019 SLC16A10Q8TF71 515 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 KMT5AQ9NQR1 393 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 PCDHA10Q9Y5I2 948 aa18.18■□□□□ 0.5
NUP50-203ENST00000407019 DENND3A2RUS2 1198 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 A6NNZ2 444 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 RTN2O75298 545 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 SGPL1O95470 568 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 ADSSP30520 456 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 MFAP3P55082 362 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 GPC5P78333 572 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 PPP2R5EQ16537 467 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 TUBB8Q3ZCM7 444 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 LRIG3Q6UXM1 1119 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 SRLQ86TD4 932 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 VSIG10LQ86VR7 867 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 FAM71AQ8IYT1 594 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 SH2D3CQ8N5H7 860 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms