RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 TTC23LQ6PF05 361 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TAOK1Q7L7X3 1001 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 C11orf96Q7Z7L8 435 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CTAGE6Q86UF2 777 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 VPS36Q86VN1 386 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 SPATA24Q86W54 205 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CACNA2D3Q8IZS8 1091 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 SPICE1Q8N0Z3 855 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CMTR1Q8N1G2 835 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CCDC89Q8N998 374 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TERB1Q8NA31 727 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 OR13H1Q8NG92 308 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 AFG1LQ8WV93 481 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ANKRD49Q8WVL7 239 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 RUFY2Q8WXA3 655 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 APPBP2Q92624 585 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PMM1Q92871 262 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 KIRREL1Q96J84 757 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PPP1R13BQ96KQ4 1090 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 C8orf48Q96LL4 319 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 GBP5Q96PP8 586 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PBX4Q9BYU1 374 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 IMPG2Q9BZV3 1241 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 DNAI2Q9GZS0 605 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ACSS3Q9H6R3 686 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CAAP1Q9H8G2 361 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 BRD9Q9H8M2 597 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 C12orf10Q9HB07 376 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 MKNK2Q9HBH9 465 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 NOD2Q9HC29 1040 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CD248Q9HCU0 757 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ZCCHC17Q9NP64 241 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PICK1Q9NRD5 415 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TCP11L1Q9NUJ3 509 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CCDC87Q9NVE4 849 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 GIN1Q9NXP7 522 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 SLC5A4Q9NY91 659 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 MAP3K20Q9NYL2 800 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TNFRSF10DQ9UBN6 386 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 STAP2Q9UGK3 403 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CCPG1Q9ULG6 757 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ZMYND8Q9ULU4 1186 aaPredicted RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 EXOC6BQ9Y2D4 811 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 LRCH1Q9Y2L9 728 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ZNF711Q9Y462 761 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 AQRO60306 1485 aaKnown RBP eCLIP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 SHANK2Q9UPX8 1470 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 KIF21AQ7Z4S6 1674 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TTC21BQ7Z4L5 1316 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 EHBP1L1Q8N3D4 1523 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 NSD2O96028 1365 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CPSF1Q10570 1443 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ERBINQ96RT1 1412 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 PDS5BQ9NTI5 1447 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ITSN2Q9NZM3 1697 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ARPC4-TTLL3A0A0A6YYG9 625 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 GTPBP10A4D1E9 387 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 MAGEA13PA6NCF6 341 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ARID3CA6NKF2 412 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 GOLGA8BA8MQT2 603 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 FADS2P1A8MWK0 482 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 FOXN3O00409 490 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 N4BP3O15049 544 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 KMOO15229 486 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SLC22A1O15245 554 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TLR3O15455 904 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ATP6V1G2O95670 118 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 APOEP02649 317 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CHGBP05060 677 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 NFICP08651 508 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 DRD2P14416 443 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ATP6V1C1P21283 382 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 IL32P24001 234 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ECE1P42892 770 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 MAGEA10P43363 369 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TMED10P49755 219 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 KPNA1P52294 538 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 RPL26P61254 145 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 NOP14P78316 857 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 S100A12P80511 92 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ITGA7Q13683 1181 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 ITIH4Q14624 930 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 TRIP4Q15650 581 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 HABP4Q5JVS0 413 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 MAP3K21Q5TCX8 1036 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 RASIP1Q5U651 963 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 IL23RQ5VWK5 629 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CCSAPQ6IQ19 270 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 C6orf89Q6UWU4 347 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 KDM7AQ6ZMT4 941 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 WAPLQ7Z5K2 1190 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 NOP9Q86U38 636 aaKnown RBP3.89□□□□□ -1.79
XRCC4-203ENST00000396027 SAPCD2Q86UD0 394 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 USP48Q86UV5 1035 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 CHD1LQ86WJ1 897 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 GRAMD2AQ8IUY3 354 aa3.89□□□□□ -1.79
XRCC4-203ENST00000396027 MAP7D3Q8IWC1 876 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms