RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 GRM3Q14832 879 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 PCOLCEQ15113 449 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 C3orf36Q3SXR2 165 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 ARHGAP29Q52LW3 1261 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 FAM26FQ5R3K3 315 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 GJC2Q5T442 439 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 CLEC14AQ86T13 490 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 GRAMD1CQ8IYS0 662 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 RTKN2Q8IZC4 609 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 MARCH10Q8NA82 808 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 BHLHE22Q8NFJ8 381 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 GPR156Q8NFN8 814 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 OR2I1PQ8NGU4 316 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 RIN2Q8WYP3 895 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 HOXB13Q92826 284 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 GFM2Q969S9 779 aaKnown RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 MVB12AQ96EY5 273 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 MAP3K14Q99558 947 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 CARD11Q9BXL7 1154 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 TMEM168Q9H0V1 697 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 C1orf112Q9NSG2 853 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 DDX20Q9UHI6 824 aaKnown RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 ADAM29Q9UKF5 820 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 INTUQ9ULD6 942 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 RPTORQ8N122 1335 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 A0A1B0GTL3 188 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 FAM171A2A8MVW0 826 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 CTNND1O60716 968 aaKnown RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 PRAMEF4O60810 478 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MAP4K4O95819 1239 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 CYP1A1P04798 512 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KRT18P05783 430 aaKnown RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ZNF888P0CJ79 500 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MRE11P49959 708 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MEOX1P50221 254 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ADAM15Q13444 863 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 SEPT2Q15019 361 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 NOMO1Q15155 1222 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 UBE3CQ15386 1083 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MST1LQ2TV78 715 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 PGS1Q32NB8 556 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ZNF385BQ569K4 471 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 C19orf54Q5BKX5 351 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 AGBL4Q5VU57 503 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 OGFOD2Q6N063 350 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ABHD15Q6UXT9 468 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MIGA2Q7L4E1 593 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 TAS1R1Q7RTX1 841 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ADGRG2Q8IZP9 1017 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 CARFQ8N187 725 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KLHL36Q8N4N3 616 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 MSL3Q8N5Y2 521 aaKnown RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ADAMTS17Q8TE56 1095 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 SNX33Q8WV41 574 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 DPF2Q92785 391 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 HDAC10Q969S8 669 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 TIFAQ96CG3 184 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 UIMC1Q96RL1 719 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 SLC38A3Q99624 504 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ACO2Q99798 780 aaKnown RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KIAA1683Q9H0B3 1180 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 BARX1Q9HBU1 254 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 ARNT2Q9HBZ2 717 aa4.03□□□□□ -1.76
PTPRC-205ENST00000391970 CTDP1Q9Y5B0 961 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-205ENST00000391970 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 C2orf78A6NCI8 922 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 C9orf118A6NHY6 69 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 H3BML4 177 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 DAPK3O43293 454 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 AKR1B10O60218 316 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 PHF2O75151 1096 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 ENDOD1O94919 500 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 MYL1P05976 194 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 AFF3P51826 1226 aaKnown RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 RRADP55042 308 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 WNT3AP56704 352 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 IL10RAQ13651 578 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 GALEQ14376 348 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 USP10Q14694 798 aaKnown RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 KCNA10Q16322 511 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 MAP9Q49MG5 647 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 ZNF648Q5T619 568 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 MCTP2Q6DN12 878 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 CYB5RLQ6IPT4 315 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 SLC4A10Q6U841 1118 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 FAM180AQ6UWF9 173 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 Q6ZVL8 140 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 GPR155Q7Z3F1 870 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 DENND1CQ8IV53 801 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 CCAR1Q8IX12 1150 aaKnown RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 POU5F2Q8N7G0 328 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 LINC01356Q8N9X3 169 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 TP53I13Q8NBR0 393 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 TXNDC5Q8NBS9 432 aaKnown RBP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 PLA2G15Q8NCC3 412 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 ZBTB34Q8NCN2 500 aa4.02□□□□□ -1.77
PTPRC-205ENST00000391970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPRC-205ENST00000391970 KAT5Q92993 513 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms