RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 VCXQ9H320 206 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 FAM205AQ6ZU69 1335 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 MROH1Q8NDA8 1641 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 LRRC31Q6UY01 552 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 RASSF4Q9H2L5 321 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 KIF9Q9HAQ2 790 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 MID2Q9UJV3 735 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 TAF6LQ9Y6J9 622 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 EIF3DO15371 548 aaKnown RBP eCLIP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 SART1O43290 800 aaKnown RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 PPARDQ03181 441 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 GFPT1Q06210 699 aaPredicted RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 PRAMEF18Q5VWM3 479 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 HINFPQ9BQA5 517 aa21.03■□□□□ 0.96
PCDH8-202ENST00000377942 CACYBPQ9HB71 228 aaKnown RBP21.03■□□□□ 0.96
PCDH8-202ENST00000377942 A8MXQ7 604 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 PSMC1P62191 440 aaKnown RBP21.02■□□□□ 0.96
PCDH8-202ENST00000377942 STILQ15468 1287 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 NDUFAF2Q8N183 169 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 AGBL1Q96MI9 1066 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 TLK1Q9UKI8 766 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 KDM4FA0A1W2PPD8 638 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 FTLP02792 175 aaPredicted RBP21.02■□□□□ 0.96
PCDH8-202ENST00000377942 EMC2Q15006 297 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 PPP6R3Q5H9R7 873 aaPredicted RBP21.02■□□□□ 0.96
PCDH8-202ENST00000377942 GMCL1Q96IK5 515 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 AP1M1Q9BXS5 423 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 MYMKA6NI61 221 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 HBP1O60381 514 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 SREBF2Q12772 1141 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 PASD1Q8IV76 773 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 ELMOD1Q8N336 334 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 RSRC1Q96IZ7 334 aaKnown RBP21.02■□□□□ 0.96
PCDH8-202ENST00000377942 ADGRG1Q9Y653 693 aa21.02■□□□□ 0.96
PCDH8-202ENST00000377942 NOL3O60936 208 aaKnown RBP21.02■□□□□ 0.95
PCDH8-202ENST00000377942 ARID5BQ14865 1188 aa21.02■□□□□ 0.95
PCDH8-202ENST00000377942 BBS9Q3SYG4 887 aa21.02■□□□□ 0.95
PCDH8-202ENST00000377942 ERO1BQ86YB8 467 aa21.02■□□□□ 0.95
PCDH8-202ENST00000377942 MT-ND3P03897 115 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 GTF2A2P52657 109 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 EPHB1P54762 984 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 PRKCEQ02156 737 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 PARD6BQ9BYG5 372 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 NXNQ6DKJ4 435 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 MKNK1Q9BUB5 465 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 NUP85Q9BW27 656 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 VCX3BQ9H321 246 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 POLRMTO00411 1230 aaKnown RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 ZMYND10O75800 440 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 ZNF189O75820 626 aaPredicted RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 PPARGP37231 505 aaPredicted RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 RPS6P62753 249 aaKnown RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 NFIAQ12857 509 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 LAMC2Q13753 1193 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 IER5Q5VY09 327 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 PCGF5Q86SE9 256 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 BCAS4Q8TDM0 211 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 ZNF668Q96K58 619 aaPredicted RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 KCNH7Q9NS40 1196 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 ERAP1Q9NZ08 941 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 RBP5P82980 135 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 CAV1Q03135 178 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 RWDD4Q6NW29 188 aaKnown RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 PGBD4Q96DM1 585 aa21.01■□□□□ 0.95
PCDH8-202ENST00000377942 CNOT10Q9H9A5 744 aaKnown RBP21.01■□□□□ 0.95
PCDH8-202ENST00000377942 GPC4O75487 556 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 GMCL1P1Q8NEA9 526 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 RFFLQ8WZ73 363 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 CYP26B1Q9NR63 512 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 DDX56Q9NY93 547 aaKnown RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 PIN4Q9Y237 131 aaKnown RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 TRAPPC3O43617 180 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 MUTP22033 750 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 ZNF746Q6NUN9 644 aaPredicted RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 PYROXD1Q8WU10 500 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 SKA2Q8WVK7 121 aaPredicted RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 TMEM143Q96AN5 459 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 NUDT12Q9BQG2 462 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 WNT8AQ9H1J5 351 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 TMEM60Q9H2L4 133 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 C17orf75Q9HAS0 396 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 A0A1B0GTH6 734 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 PLSCR1O15162 318 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 GAS2O43903 313 aaKnown RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 WDR70Q9NW82 654 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 TMX2Q9Y320 296 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 NPHP3-ACAD11A0A0J9YXS1 232 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 CCDC160A6NGH7 325 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 RRN3P2A6NIE6 340 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 RASGRF2O14827 1237 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 SUN1O94901 812 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 C6orf222P0C671 652 aaPredicted RBP21■□□□□ 0.95
PCDH8-202ENST00000377942 TXNRD3Q86VQ6 643 aa21■□□□□ 0.95
PCDH8-202ENST00000377942 RAB3IPQ96QF0 476 aaPredicted RBP20.99■□□□□ 0.95
PCDH8-202ENST00000377942 NUDCD1Q96RS6 583 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 EXOC1LA0A1B0GW35 172 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 BACE1P56817 501 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 CXCL9Q07325 125 aa20.99■□□□□ 0.95
PCDH8-202ENST00000377942 STK33Q9BYT3 514 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms