RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 JAK3P52333 1124 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 JAM2P57087 298 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 ZNF572Q7Z3I7 529 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 SLC9A9Q8IVB4 645 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 SRRDQ9UH36 339 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 ATP9AO75110 1047 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PPP1R37O75864 691 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 LYPLA2O95372 231 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 MAPTP10636 758 aaKnown RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 ELNP15502 786 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 SFNP31947 248 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 FCGRTP55899 365 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PSMC5P62195 406 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 FAM193AP78312 1265 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 KRT76Q01546 638 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 BFSP1Q12934 665 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 CBWD3Q5JTY5 395 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 CBWD5Q5RIA9 395 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 MOV10L1Q9BXT6 1211 aaKnown RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 BTNL10A8MVZ5 291 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 CCND2P30279 289 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 MYL7Q01449 175 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 CETN1Q12798 172 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 HSP90B2PQ58FF3 399 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 NLRX1Q86UT6 975 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 GJD2Q9UKL4 321 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 TMEM150BA6NC51 233 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 F8VZ95 297 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 EVI5O60447 810 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 SOX5P35711 763 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 TRIM32Q13049 653 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 FAM102BQ5T8I3 360 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 XRRA1Q6P2D8 792 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 INTS8Q75QN2 995 aaKnown RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 TAF4BQ92750 862 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 MS4A14Q96JA4 679 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 LRRC1Q9BTT6 524 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 INTS2Q9H0H0 1204 aaKnown RBP13.13□□□□□ -0.31
HMGCL-202ENST00000374487 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
HMGCL-202ENST00000374487 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
HMGCL-202ENST00000374487 GRID2IPA4D2P6 1211 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 BACH1O14867 736 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 CYP2B6P20813 491 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 PEX3P56589 373 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
HMGCL-202ENST00000374487 UGCGQ16739 394 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
HMGCL-202ENST00000374487 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 U2AF1L4Q8WU68 220 aaKnown RBP13.12□□□□□ -0.31
HMGCL-202ENST00000374487 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 HINFPQ9BQA5 517 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 SPATC1LQ9H0A9 340 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 ADAMTS5Q9UNA0 930 aa13.12□□□□□ -0.31
HMGCL-202ENST00000374487 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
HMGCL-202ENST00000374487 PARP14Q460N5 1801 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 SLC16A4O15374 487 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 CCNE2O96020 404 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 NR3C2P08235 984 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 SMTNP53814 917 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 SOX10P56693 466 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
HMGCL-202ENST00000374487 CCL14Q16627 93 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms