RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CTC1Q2NKJ3 1217 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CENPPQ6IPU0 288 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 PPP2R3CQ969Q6 453 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 DYDC2Q96IM9 177 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 FAM81BQ96LP2 452 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CATSPER2Q96P56 530 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 STMN4Q9H169 189 aaPredicted RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 PFASO15067 1338 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 FGGP02679 453 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CDK4P11802 303 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 SERPINB3P29508 390 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 LONP1P36776 959 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 ADARP55265 1226 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 DR1Q01658 176 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 TMED1Q13445 227 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 KIAA1755Q5JYT7 1200 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF362Q5T0B9 420 aaPredicted RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 KLC3Q6P597 504 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 ANKRD13DQ6ZTN6 518 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 HS2ST1Q7LGA3 356 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 TPCN2Q8NHX9 752 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 PITPNM3Q9BZ71 974 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 CLIC5Q9NZA1 410 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 PCDHA3Q9Y5H8 950 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 BOLA2-SMG1P6H3BVE0 249 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 ASMTLO95671 621 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 ALDH2P05091 517 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 ADD2P35612 726 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 DRG2P55039 364 aaKnown RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 PDE4DQ08499 809 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 ZCWPW2Q504Y3 356 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 DCAF12L1Q5VU92 463 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 CROCCP2Q86T23 111 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 SATL1Q86VE3 508 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 GRAMD1AQ96CP6 724 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 POLR3CQ9BUI4 534 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 CEP72Q9P209 647 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 TTC7AQ9ULT0 858 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 C5P01031 1676 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 ERVV-2B6SEH9 535 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 EYA2O00167 538 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 SOCS7O14512 581 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 MAP3K7O43318 606 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 BCRP11274 1271 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 MLH1P40692 756 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 MAP7Q14244 749 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 HES6Q96HZ4 224 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 EPB41L4AQ9HCS5 686 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 LUC7LQ9NQ29 371 aaKnown RBP10.24□□□□□ -0.77
SF3A3-201ENST00000373019 AKAP11Q9UKA4 1901 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 MEGF6O75095 1541 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 UMODL1Q5DID0 1318 aa10.24□□□□□ -0.77
SF3A3-201ENST00000373019 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 GALK1P51570 392 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SH3BGRP55822 239 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ARID5AQ03989 594 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 PIK3AP1Q6ZUJ8 805 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM110Q86TL2 294 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 NT5DC3Q86UY8 548 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 OLFM3Q96PB7 478 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 KCNK9Q9NPC2 374 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF212Q9UDV6 495 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 STARD13Q9Y3M8 1113 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 BTBD19C9JJ37 291 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 NAT1P18440 290 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 RPL21P46778 160 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 WTAPQ15007 396 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ARL6IP4Q66PJ3 421 aaKnown RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ARHGAP27Q6ZUM4 889 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 JAMLQ86YT9 394 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 WDR66Q8TBY9 1149 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 GAB3Q8WWW8 586 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 IL1RAPL1Q9NZN1 696 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SUCLA2Q9P2R7 463 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 GLI3P10071 1580 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 VILLO15195 856 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 MAPK13O15264 365 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 ZFXP17010 805 aaPredicted RBP10.23□□□□□ -0.77
SF3A3-201ENST00000373019 GTF2H1P32780 548 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 RASSF2P50749 326 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 MAP3K10Q02779 954 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 PPP2R5CQ13362 524 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 SLC44A4Q53GD3 710 aa10.23□□□□□ -0.77
SF3A3-201ENST00000373019 CCDC92Q53HC0 331 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms