RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.98e-8■□□□□ 10.9
SMARCA1-203ENST00000371123 GANQ9H2C0 597 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 INIPQ9NRY2 104 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 TOGARAM1Q9Y4F4 1720 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 NHSQ6T4R5 1651 aa9.41□□□□□ -0.9
SMARCA1-203ENST00000371123 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 BAG3O95817 575 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 CFBP00751 764 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PSMC4P43686 418 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 RPL21P46778 160 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PMS2P54278 862 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 MRPS35P82673 323 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 TXNRD1Q16881 649 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 LONRF1Q17RB8 773 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PRR16Q569H4 304 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PLEKHG4Q58EX7 1191 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 U2AF1L4Q8WU68 220 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PTPRN2Q92932 1015 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 LRMDAQ9H2I8 198 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 DHX36Q9H2U1 1008 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 SNX24Q9Y343 169 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 QSER1Q2KHR3 1735 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L15C9J2P7 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L11C9JVI0 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L18D6R9N7 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L22D6RA61 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L19D6RCP7 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L20D6RJB6 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 KRIT1O00522 736 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 ATP9AO75110 1047 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 GYS1P13807 737 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 RXRBP28702 533 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 HOXA13P31271 388 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 STAT3P40763 770 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L24Q0WX57 530 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 CALCRLQ16602 461 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 EXOC3L4Q17RC7 722 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 USP17L6PQ6QN14 398 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 PWWP2AQ96N64 755 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 TUBGCP5Q96RT8 1024 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 EYA3Q99504 573 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 TRIM4Q9C037 500 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 RREB1Q92766 1687 aa9.4□□□□□ -0.9
SMARCA1-203ENST00000371123 MAGEB3O15480 346 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 KRT36O76013 467 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 CACNA2D1P54289 1103 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF211Q13398 564 aaPredicted RBP9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 ECM1Q16610 540 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 CCDC174Q6PII3 467 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 KCNK18Q7Z418 384 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 WDR60Q8WVS4 1066 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 DNAJC9Q8WXX5 260 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 ALG3Q92685 438 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 C18orf8Q96DM3 657 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 HES6Q96HZ4 224 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 C6orf50Q9HD87 102 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 BLOC1S4Q9NUP1 217 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.91
SMARCA1-203ENST00000371123 MYMKA6NI61 221 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 A6NJR5 290 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 CES2O00748 559 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 LUC7L3O95232 432 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 OATP04181 439 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 RTP1P59025 263 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TNNC1P63316 161 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 KLC1Q07866 573 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 MFSD14BQ5SR56 506 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 NUDCD1Q96RS6 583 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 FMO2Q99518 471 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 SAMD15Q9P1V8 674 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 LOC102724428A0A0B4J2F2 783 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TMEM120BA0PK00 339 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TBX10O75333 385 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 OR6B1O95007 311 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TAC1P20366 129 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 SIK1P57059 783 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 AMPD3Q01432 767 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 FAM182AQ5T1J6 154 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 FGD4Q96M96 766 aa9.39□□□□□ -0.91
SMARCA1-203ENST00000371123 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms