RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 DNAAF3Q8N9W5 541 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 POP1Q99575 1024 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 PFDN4Q9NQP4 134 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 MORC2Q9Y6X9 1032 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 RFX7Q2KHR2 1363 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 TCRBV5S4A2TA0A5A2 114 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 POLR2BP30876 1174 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 AP3B2Q13367 1082 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 NBPF9Q3BBW0 867 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 MIS18BP1Q6P0N0 1132 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 RSRC2Q7L4I2 434 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 CCDC197Q8NCU1 140 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 ZNF564Q8TBZ8 553 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 FAM20AQ96MK3 541 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 FAM114A2Q9NRY5 505 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 MYO9BQ13459 2157 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 CYTH3O43739 400 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 GRB10Q13322 594 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 SHROOM1Q2M3G4 852 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 C16orf86Q6ZW13 317 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 TRIM59Q8IWR1 403 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 DCAF4Q8WV16 495 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 ZKSCAN4Q969J2 545 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 TTC17Q96AE7 1141 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 KLF6Q99612 283 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 WDR64B1ANS9 1081 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 BNIP3LO60238 219 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PSAPP07602 524 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 KITP10721 976 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PSMA2P25787 234 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 CCND2P30279 289 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 SPOUT1Q5T280 376 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 LRRC71Q8N4P6 559 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PPP1R13LQ8WUF5 828 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 RNPC3Q96LT9 517 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 RUSC1Q9BVN2 902 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PIM2Q9P1W9 311 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 DBR1Q9UK59 544 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 E2F8A0AVK6 867 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 CRCPO75575 148 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 MMEP08473 750 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 GPC5P78333 572 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 SBK1Q52WX2 424 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 KDELC2Q7Z4H8 507 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 AGR3Q8TD06 166 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 ATXN7L3BQ96GX2 97 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PBKQ96KB5 322 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 AFG3L2Q9Y4W6 797 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 A0A0G2JND7 137 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PABPN1LA6NDY0 278 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 PSMD14O00487 310 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 CCDC14Q49A88 953 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 KCNK18Q7Z418 384 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 FAM160B2Q86V87 743 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 ANKMY2Q8IV38 441 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 RNF149Q8NC42 400 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 SLC35G2Q8TBE7 412 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 RMDN2Q96LZ7 410 aa9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 POLR3FQ9H1D9 316 aaPredicted RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 DDX4Q9NQI0 724 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-202ENST00000371122 A6NJR5 290 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 hCG_1984214I3L0E3 225 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 TLR3O15455 904 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 KCNB1Q14721 858 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 COG2Q14746 738 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 FAM160B1Q5W0V3 765 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 EMBQ6PCB8 327 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 CCDC137Q6PK04 289 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ZNF713Q8N859 430 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 RAB3IL1Q8TBN0 382 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 HDAC7Q8WUI4 952 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ANKRD7Q92527 254 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ANKRD36BP1Q96IX9 119 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 SDK1Q7Z5N4 2213 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 GPR75-ASB3A0A0A6YYF3 556 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 PHF20L1A8MW92 1017 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 M0QZ92 97 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 STK10O94804 968 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 TROVE2P10155 538 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ARP10275 920 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 P4HA1P13674 534 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 GYS1P13807 737 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 YWHABP31946 246 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 PLA2G4AP47712 749 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 RGS7P49802 495 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 SLC12A2P55011 1212 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 BPIFB4P59827 614 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 KCNA1Q09470 495 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 WDR72Q3MJ13 1102 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 MDM1Q8TC05 714 aa9.74□□□□□ -0.85
SMARCA1-202ENST00000371122 ATG4CQ96DT6 458 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms