RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SRRTQ9BXP5 876 aaKnown RBP12.01□□□□□ -0.49
BRCC3-204ENST00000369462 NFKBIZQ9BYH8 718 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 ADAMTS10Q9H324 1103 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 SAMSN1Q9NSI8 373 aaKnown RBP12.01□□□□□ -0.49
BRCC3-204ENST00000369462 EXOC7Q9UPT5 735 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 CLIC2O15247 247 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 IQCF3P0C7M6 154 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 PHLPP2Q6ZVD8 1323 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 CALUO43852 315 aaPredicted RBP12.01□□□□□ -0.49
BRCC3-204ENST00000369462 CTSHP09668 335 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 THPOP40225 353 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 CDK7P50613 346 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 PTK7Q13308 1070 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 GCOM2Q9BZD3 368 aaPredicted RBP12.01□□□□□ -0.49
BRCC3-204ENST00000369462 CCDC113Q9H0I3 377 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 HSD3B7Q9H2F3 369 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 AGPAT3Q9NRZ7 376 aa12.01□□□□□ -0.49
BRCC3-204ENST00000369462 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 ANKRD63C9JTQ0 380 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 RBAK-RBAKDNI3L0D1 243 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 EDN1P05305 212 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 PRKCBP05771 671 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 NR2F2P24468 414 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 FKBP3Q00688 224 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 ADAM9Q13443 819 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 CREBRFQ8IUR6 639 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 ANKLE1Q8NAG6 615 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 KCNN1Q92952 543 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 PAWRQ96IZ0 340 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 SEZ6LQ9BYH1 1024 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 FZD8Q9H461 694 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 M0QZ92 97 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 EIF4BP23588 611 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 LIG4P49917 911 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 TPM4P67936 248 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 MRPS6P82932 125 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 SLC39A5Q6ZMH5 540 aa12□□□□□ -0.49
BRCC3-204ENST00000369462 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 CELF4Q9BZC1 486 aaKnown RBP12□□□□□ -0.49
BRCC3-204ENST00000369462 ACKR2O00590 384 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 B4GALT5O43286 388 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 PQBP1O60828 265 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 NR3C1P04150 777 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 COL6A1P12109 1028 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 ATP1A3P13637 1013 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 FGFR4P22455 802 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 SLC39A4Q6P5W5 647 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 FOXR2Q6PJQ5 311 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 SRGAP1Q7Z6B7 1085 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 RPAINQ86UA6 219 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 GOLGA5Q8TBA6 731 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 MRPL4Q9BYD3 311 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 PRMT7Q9NVM4 692 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CDY2AQ9Y6F7 541 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 RPLP2P05387 115 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 DARSP14868 501 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 RPL13P26373 211 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 ADSSP30520 456 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CYP2J2P51589 502 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CRYBB1P53674 252 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 PRPF4BQ13523 1007 aaKnown RBP11.99□□□□□ -0.49
BRCC3-204ENST00000369462 SNX17Q15036 470 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 ARMCX5Q6P1M9 558 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 LRRC55Q6ZSA7 311 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CBWD1Q9BRT8 395 aa11.99□□□□□ -0.49
BRCC3-204ENST00000369462 CETN3O15182 167 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 ERLIN2O94905 339 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CHRNA1P02708 482 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 IRF2BP1Q8IU81 584 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 POMGNT1Q8WZA1 660 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 ZBTB45Q96K62 511 aaPredicted RBP11.98□□□□□ -0.49
BRCC3-204ENST00000369462 PIGRP01833 764 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 ZNF18P17022 549 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 AMHR2Q16671 573 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 TRIM71Q2Q1W2 868 aaKnown RBP11.98□□□□□ -0.49
BRCC3-204ENST00000369462 UVSSAQ2YD98 709 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CATSPER4Q7RTX7 472 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CDR2LQ86X02 465 aaPredicted RBP11.98□□□□□ -0.49
BRCC3-204ENST00000369462 ACO2Q99798 780 aaKnown RBP11.98□□□□□ -0.49
BRCC3-204ENST00000369462 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 THAP9Q9H5L6 903 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 CGNQ9P2M7 1197 aaKnown RBP11.98□□□□□ -0.49
BRCC3-204ENST00000369462 ANKFY1Q9P2R3 1169 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 TRPV2Q9Y5S1 764 aa11.98□□□□□ -0.49
BRCC3-204ENST00000369462 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
BRCC3-204ENST00000369462 CD4P01730 458 aa11.97□□□□□ -0.49
BRCC3-204ENST00000369462 MATR3P43243 847 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■■■□ 22.8
BRCC3-204ENST00000369462 MRE11P49959 708 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms