RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CILP2Q8IUL8 1156 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 HSCBQ8IWL3 235 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TEX19Q8NA77 164 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 VPS37AQ8NEZ2 397 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 KCNN1Q92952 543 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 SLC38A3Q99624 504 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 CNTD2Q9H8S5 307 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 AS3MTQ9HBK9 375 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TIMM13Q9Y5L4 95 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TTC21BQ7Z4L5 1316 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ZNF541Q9H0D2 1346 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 CEP290O15078 2479 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ANKRD31Q8N7Z5 1873 aa5.96□□□□□ -1.45
ECHDC1-204ENST00000368292 LAMA3Q16787 3333 aa5.96□□□□□ -1.45
ECHDC1-204ENST00000368292 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 TCRBV16S1A1N1A0A5B0 115 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 ZC3H12DA2A288 527 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 SEMA7AO75326 666 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 RASGRP1O95267 797 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 TSPAN15O95858 294 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 POU3F2P20265 443 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 GLDCP23378 1020 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 EPHX2P34913 555 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 BCL6P41182 706 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 DLG4P78352 724 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 PCBP1Q15365 356 aaKnown RBP eCLIP5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 ZKSCAN8Q15776 578 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 TMC6Q7Z403 805 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 KRT77Q7Z794 578 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 STRA8Q7Z7C7 330 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 SAPCD2Q86UD0 394 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 NLRP10Q86W26 655 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 Q8N1Y9 231 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 AFAP1L2Q8N4X5 818 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 ZNF830Q96NB3 372 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 MARCH2Q9P0N8 246 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 CENPFP49454 3210 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 MON2Q7Z3U7 1717 aa5.96□□□□□ -1.46
ECHDC1-204ENST00000368292 KDRP35968 1356 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CARMIL3Q8ND23 1372 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 F8W031 263 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 POLRMTO00411 1230 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 MSCO60682 206 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 RNASEH2AO75792 299 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CRTAMO95727 393 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ASLP04424 464 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 MYL1P05976 194 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 TGFB3P10600 412 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 FPR2P25090 351 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CASP2P42575 452 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 PRR5P85299 388 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 NFKB2Q00653 900 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CALD1Q05682 793 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 TMEM95Q3KNT9 176 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ATG14Q6ZNE5 492 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 PIGBQ92521 554 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CCDC47Q96A33 483 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 TTC14Q96N46 770 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 PPP1R16BQ96T49 567 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 SEZ6LQ9BYH1 1024 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ALDH8A1Q9H2A2 487 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CXorf56Q9H5V9 222 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ARNT2Q9HBZ2 717 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 CD320Q9NPF0 282 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 RAI14Q9P0K7 980 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 SRP68Q9UHB9 627 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 POLG2Q9UHN1 485 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 HACL1Q9UJ83 578 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ASAP1Q9ULH1 1129 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ODF2LQ9ULJ1 636 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 PCDHA2Q9Y5H9 948 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 AKAP11Q9UKA4 1901 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 RNF123Q5XPI4 1314 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 IRS2Q9Y4H2 1338 aa5.95□□□□□ -1.46
ECHDC1-204ENST00000368292 ZNF831Q5JPB2 1677 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 C22orf46C9J442 243 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 MTA2O94776 668 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 EYA4O95677 639 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 NTRK1P04629 796 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 TMEM253P0C7T8 217 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 FBLN1P23142 703 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 RRM1P23921 792 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 HMGB2P26583 209 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 TNNT2P45379 298 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 CDR1P51861 262 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 EPHB3P54753 998 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 TMEM62Q0P6H9 643 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 SIM2Q14190 667 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 CCDC93Q567U6 631 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 C10orf62Q5T681 223 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 WWC2Q6AWC2 1192 aa5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 ZC3H14Q6PJT7 736 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-204ENST00000368292 CEP68Q76N32 757 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms