RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TDRD3Q9H7E2 651 aaKnown RBP6.21□□□□□ -1.42
CD47-201ENST00000355354 ZFC3H1O60293 1989 aaKnown RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 EPB41L2O43491 1005 aaKnown RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 ARP10275 920 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 PRMT2P55345 433 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 USH1GQ495M9 461 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 EFCAB3Q8N7B9 438 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 FAM133AQ8N9E0 248 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 GRIN3AQ8TCU5 1115 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 ZNF419Q96HQ0 510 aaPredicted RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 GABRQQ9UN88 632 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 DAPK3O43293 454 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 IFT88Q13099 833 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 DCAF6Q58WW2 860 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 GPR108Q9NPR9 543 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 OTOGQ6ZRI0 2925 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 KCNJ18B7U540 433 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 N4BP3O15049 544 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 HOXC6P09630 235 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 TFE3P19532 575 aaPredicted RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 CHMP4BP1P59074 171 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 SPAG1Q07617 926 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 SEPT2Q15019 361 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 IMMTQ16891 758 aaKnown RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 CCDC178Q5BJE1 867 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 CENPPQ6IPU0 288 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 TRNP1Q6NT89 227 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 MFSD6Q6ZSS7 791 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 PAXIP1Q6ZW49 1069 aaPredicted RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 HEATR3Q7Z4Q2 680 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 MXRA8Q9BRK3 442 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 SYT11Q9BT88 431 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 DISC1Q9NRI5 854 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 NKX1-2Q9UD57 310 aaPredicted RBP6.2□□□□□ -1.42
CD47-201ENST00000355354 IGKV6D-41A0A0C4DH26 115 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 CLRN2A0PK11 232 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 TTI1O43156 1089 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 SP2Q02086 613 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 TTC38Q5R3I4 469 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 ZDHHC24Q6UX98 284 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 NSMFQ6X4W1 530 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 KRT222Q8N1A0 295 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 PSD4Q8NDX1 1056 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 TRPV1Q8NER1 839 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 PKDREJQ9NTG1 2253 aa6.2□□□□□ -1.42
CD47-201ENST00000355354 PES1O00541 588 aaKnown RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 NFIBO00712 420 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 DDX58O95786 925 aaKnown RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 OSBPP22059 807 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 PRKCIP41743 596 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CEP57L1Q8IYX8 460 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 GIMAP8Q8ND71 665 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 ZNF397Q8NF99 534 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 BSNDQ8WZ55 320 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 SELENOOQ9BVL4 669 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 EPS8L2Q9H6S3 715 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 TMPRSS4Q9NRS4 437 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ABCF3Q9NUQ8 709 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CALCOCO1Q9P1Z2 691 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 EVLQ9UI08 416 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 AXIN1O15169 862 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 RAD21O60216 631 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 MYCNP04198 464 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 IDEP14735 1019 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CHKAP35790 457 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 TMEM62Q0P6H9 643 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 RRAGBQ5VZM2 374 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CCNI2Q6ZMN8 369 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 CATSPER3Q86XQ3 398 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 RMDN2Q96LZ7 410 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 NHEJ1Q9H9Q4 299 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 FLRT1Q9NZU1 646 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 SRRDQ9UH36 339 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 PLAGL2Q9UPG8 496 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 RPN1P04843 607 aaKnown RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 IQCF3P0C7M6 154 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 VPS41P49754 854 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ASIC2Q16515 512 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CCDC73Q6ZRK6 1079 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 MKNK1Q9BUB5 465 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 PANK4Q9NVE7 773 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ARHGEF17Q96PE2 2063 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 KMT2BQ9UMN6 2715 aaPredicted RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 GOLGA6L19H0YKK7 550 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CAND2O75155 1236 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CDK8P49336 464 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 PUM3Q15397 648 aaKnown RBP6.19□□□□□ -1.42
CD47-201ENST00000355354 CDHR3Q6ZTQ4 885 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 OTUD6AQ7L8S5 288 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ERO1BQ86YB8 467 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ZNF276Q8N554 614 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 METTL13Q8N6R0 699 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 TXNRD2Q9NNW7 524 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 ANO10Q9NW15 660 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 CEP72Q9P209 647 aa6.19□□□□□ -1.42
CD47-201ENST00000355354 MPDZO75970 2070 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms