RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 HEATR3Q7Z4Q2 680 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ZC3H3Q8IXZ2 948 aaKnown RBP8.16□□□□□ -1.1
C11orf54-202ENST00000354421 TDHQ8IZJ6 230 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 LRRC57Q8N9N7 239 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 RAD54LQ92698 747 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 N4BP2L2Q92802 583 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-202ENST00000354421 NSUN4Q96CB9 384 aaKnown RBP8.16□□□□□ -1.1
C11orf54-202ENST00000354421 HVCN1Q96D96 273 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 MTMR9Q96QG7 549 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 SPZ1Q9BXG8 430 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 GANQ9H2C0 597 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 CENPHQ9H3R5 247 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 PGAP2Q9UHJ9 254 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 FBXL5Q9UKA1 691 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ZFHX4Q86UP3 3567 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ROBO3Q96MS0 1386 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ESYT2A0FGR8 921 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 F8VZ95 297 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 F8W031 263 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 PGRMC1O00264 195 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 CYTH3O43739 400 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 NTSR2O95665 410 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 ERCC3P19447 782 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 SMARCA1P28370 1054 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 IRS1P35568 1242 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TECP42680 631 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 SLC8A3P57103 927 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 FKBP3Q00688 224 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TFAP4Q01664 338 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 ATP2B2Q01814 1243 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 KLHL30Q0D2K2 578 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 RIPK1Q13546 671 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 ITPK1Q13572 414 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 PDIA5Q14554 519 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 LETM2Q2VYF4 491 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 CAVIN4Q5BKX8 364 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 ERMARDQ5T6L9 678 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TMC3Q7Z5M5 1100 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TEX11Q8IYF3 940 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 MYOCDQ8IZQ8 938 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 C2orf69Q8N8R5 385 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 OR2W6PQ8NHA6 318 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 LARP4BQ92615 738 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 XPO6Q96QU8 1125 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.17e-6■■□□□ 11.5
C11orf54-202ENST00000354421 CFHR5Q9BXR6 569 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 TXLNGYQ9BZA5 131 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 FAM129AQ9BZQ8 928 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 NEUROG2Q9H2A3 272 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 C6orf50Q9HD87 102 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 FAM114A2Q9NRY5 505 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 NENFQ9UMX5 172 aa8.15□□□□□ -1.1
C11orf54-202ENST00000354421 NOVA2Q9UNW9 492 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 BZW2Q9Y6E2 419 aaKnown RBP8.15□□□□□ -1.1
C11orf54-202ENST00000354421 A0A0A6YYK5 440 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC189A1A4V9 331 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 KCNK3O14649 394 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 ASAP2O43150 1006 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 SART1O43290 800 aaKnown RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CEP104O60308 925 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CCNT1O60563 726 aaKnown RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 PPFIA2O75334 1257 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 TMOD1P28289 359 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 GNA11P29992 359 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 TM4SF1P30408 202 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 POLR2FP61218 127 aaKnown RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 MECOMQ03112 1051 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 LMNB2Q03252 620 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 ITIH4Q14624 930 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 SOGA3Q5TF21 947 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 C12orf60Q5U649 245 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 SLFN11Q7Z7L1 901 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC197Q8NCU1 140 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC26Q8TAB7 109 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 UBLCP1Q8WVY7 318 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 FAM84BQ96KN1 310 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 PSMD1Q99460 953 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 PACSIN1Q9BY11 444 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 SUCLA2Q9P2R7 463 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 INTUQ9ULD6 942 aa8.15□□□□□ -1.11
C11orf54-202ENST00000354421 TTC7AQ9ULT0 858 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 PACSIN2Q9UNF0 486 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-202ENST00000354421 A0A1B0GUA9 196 aa8.14□□□□□ -1.11
C11orf54-202ENST00000354421 CFAP73A6NFT4 308 aa8.14□□□□□ -1.11
C11orf54-202ENST00000354421 SLC26A4O43511 780 aa8.14□□□□□ -1.11
C11orf54-202ENST00000354421 GPR37L1O60883 481 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms