RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
TNFRSF12A-202ENST00000341627 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.32
TNFRSF12A-202ENST00000341627 HOXA2O43364 376 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TSPAN1O60635 241 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 DGKIO75912 1065 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PLS3P13797 630 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 NPTX2P47972 431 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SMTNP53814 917 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 NAALADL2Q58DX5 795 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ARSHQ5FYA8 562 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ECHDC2Q86YB7 292 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 IQUBQ8NA54 791 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PYM1Q9BRP8 204 aaKnown RBP17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
TNFRSF12A-202ENST00000341627 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 XIRP2A4UGR9 3374 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SFI1A8K8P3 1242 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 FAM13AO94988 1023 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 EOMESO95936 686 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TMEM132AQ24JP5 1023 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 RESP18Q5W5W9 173 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ADALQ6DHV7 355 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CMTR2Q8IYT2 770 aaKnown RBP17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SPIRE2Q8WWL2 714 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 LRRC27Q9C0I9 530 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 FZD8Q9H461 694 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 FAM105AQ9NUU6 356 aa17■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ADGRA3Q8IWK6 1321 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 REV3LO60673 3130 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 A0A087X0B3 334 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 H0YCG3 227 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 K7ERI5 159 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ZNF623O75123 536 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PRKCBP05771 671 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 LINC00271P0C7V0 271 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ARF4P18085 180 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 LIG1P18858 919 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PRPF4BQ13523 1007 aaKnown RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 GIT2Q14161 759 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 AMHR2Q16671 573 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ABI1Q8IZP0 508 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 FIBCD1Q8N539 461 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CNNM3Q8NE01 707 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 GDPD5Q8WTR4 605 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 DHX58Q96C10 678 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PGBD4Q96DM1 585 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 NTPCRQ9BSD7 190 aaKnown RBP16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PARVGQ9HBI0 331 aa16.99■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ACKR2O00590 384 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 B4GALT5O43286 388 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 GTPBP6O43824 516 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SCP2P22307 547 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CMA1P23946 247 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 AMPD3Q01432 767 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 EPC2Q52LR7 807 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 RSPH1Q8WYR4 309 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CPB2Q96IY4 423 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SAMD11Q96NU1 681 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TRIM6Q9C030 488 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TNMDQ9H2S6 317 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 MAGEF1Q9HAY2 307 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ARHGAP28Q9P2N2 729 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 KCNH3Q9ULD8 1083 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PCDHB2Q9Y5E7 798 aa16.98■□□□□ 0.31
TNFRSF12A-202ENST00000341627 COL4A6Q14031 1691 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 PRRC2BQ5JSZ5 2229 aaKnown RBP16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 N4BP3O15049 544 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SLC16A4O15374 487 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ZNF131P52739 623 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 STRN3Q13033 797 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 E2F4Q16254 413 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 ZNF598Q86UK7 904 aaKnown RBP16.97■□□□□ 0.31
TNFRSF12A-202ENST00000341627 TMEM192Q8IY95 271 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms