RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CDO1Q16878 200 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 GPD1LQ8N335 351 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 OR6B3Q8NGW1 331 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 AGXT2Q9BYV1 514 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF302Q9NR11 478 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 COPEO14579 308 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 KRT3P12035 628 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 WDR75Q8IWA0 830 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 HSPH1Q92598 858 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 APEX2Q9UBZ4 518 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 FOXP2O15409 715 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 RTN2O75298 545 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 PPP4CP60510 307 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 HSP90AA5PQ58FG0 334 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF449Q6P9G9 518 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 EPM2AIP1Q7L775 607 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZWINTO95229 277 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 THOC5Q13769 683 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 GPR162Q16538 588 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 JADE1Q6IE81 842 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 CYP26B1Q9NR63 512 aa18.23■□□□□ 0.51
TRAPPC11-201ENST00000334690 ENTPD3O75355 529 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 NLRP14Q86W24 1093 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 ABI1Q8IZP0 508 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 CFAP36Q96G28 342 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 ACAD9Q9H845 621 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 KIF22Q14807 665 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 CRLF3Q8IUI8 442 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 DAGLBQ8NCG7 672 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 LRGUKQ96M69 825 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 NUDCD1Q96RS6 583 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 MKNK1Q9BUB5 465 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 EFHD1Q9BUP0 239 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 UVRAGQ9P2Y5 699 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 PPP1R37O75864 691 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 TTC4O95801 387 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZSCAN20P17040 1043 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 FMO5P49326 533 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 GALCP54803 685 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 BYSLQ13895 437 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 SYT2Q8N9I0 419 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 DEPDC1BQ8WUY9 529 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 CHMP6Q96FZ7 201 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 TTI1O43156 1089 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 NAB2Q15742 525 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 BEND6Q5SZJ8 279 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 FAM47EQ6ZV65 393 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 MCUQ8NE86 351 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 PPP1R9AQ9ULJ8 1098 aa18.22■□□□□ 0.51
TRAPPC11-201ENST00000334690 ZNF185O15231 689 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 RPA1P27694 616 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 SNF8Q96H20 258 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 NOP53Q9NZM5 478 aaKnown RBP18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 ATP8B3O60423 1300 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 AFF2P51816 1311 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 SLC1A1P43005 524 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 BAG5Q9UL15 447 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 PLAGL2Q9UPG8 496 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 GPC3P51654 580 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 TMPRSS15P98073 1019 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 TAP1Q03518 808 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 SPOPLQ6IQ16 392 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 MAML1Q92585 1016 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 TTC17Q96AE7 1141 aa18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 DDX56Q9NY93 547 aaKnown RBP18.21■□□□□ 0.51
TRAPPC11-201ENST00000334690 NEURL4Q96JN8 1562 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 SDC4P31431 198 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 TAF11Q15544 211 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 SYN2Q92777 582 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 SDCCAG3Q96C92 435 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 DONSONQ9NYP3 566 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 DGAT1O75907 488 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 DUOXA2Q1HG44 320 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 MARCH10Q8NA82 808 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 HNRNPLLQ8WVV9 542 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 FAM96AQ9H5X1 160 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 CPSF3Q9UKF6 684 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 SCP2P22307 547 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 YWHABP31946 246 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 PSMC1P62191 440 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 LPAR1Q92633 364 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 VPS39Q96JC1 886 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 TRIM56Q9BRZ2 755 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 EFNA5P52803 228 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms