RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 BMP8BP34820 402 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 NPTX2P47972 431 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 SARSP49591 514 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PAK1Q13153 545 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RAB30Q15771 203 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 KNOP1Q1ED39 458 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 UVSSAQ2YD98 709 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TRIM60Q495X7 471 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FILIP1LQ4L180 1135 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FBXO47Q5MNV8 452 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PLA2G4FQ68DD2 849 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF720Q7Z2F6 126 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 SFR1Q86XK3 245 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RHPN2Q8IUC4 686 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TMC2Q8TDI7 906 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ADAMTS10Q9H324 1103 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 THAP9Q9H5L6 903 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ASB7Q9H672 318 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 XPNPEP1Q9NQW7 623 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 AGPAT5Q9NUQ2 364 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TBX20Q9UMR3 447 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 STYXL1Q9Y6J8 313 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 DENND3A2RUS2 1198 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 OGTO15294 1046 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 INPPL1O15357 1258 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ADCY6O43306 1168 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PQBP1O60828 265 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 C1RP00736 705 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RFX1P22670 979 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 GRM5P41594 1212 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PEX3P56589 373 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FKBP3Q00688 224 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 EHHADHQ08426 723 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ELAVL2Q12926 359 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 SNW1Q13573 536 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 MORC3Q14149 939 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 NOLC1Q14978 699 aaKnown RBP eCLIP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FOXD4L6Q3SYB3 417 aaPredicted RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 LONRF3Q496Y0 759 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 KMT5BQ4FZB7 885 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FOXD4L3Q6VB84 417 aaPredicted RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TAF4BQ92750 862 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 FTOQ9C0B1 505 aaKnown RBP eCLIP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TRAF3IP3Q9Y228 551 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PP2D1A8MPX8 630 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ZBTB42B2RXF5 422 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 GOLGA6L19H0YKK7 550 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 INO80B-WBP1J3KQ70 363 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 B4GALT4O60513 344 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 IQCF3P0C7M6 154 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 P4HA1P13674 534 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CYP3A5P20815 502 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CDC25AP30304 524 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PNPLA4P41247 253 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 AFMP43652 599 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CAPSQ13938 189 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ATF7IP2Q5U623 682 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 INTS8Q75QN2 995 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TRIM50Q86XT4 487 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM161BQ8NDZ6 487 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 DNAJB3Q8WWF6 145 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 P2RX5Q93086 422 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM175Q9BSA9 504 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 FAM49AQ9H0Q0 323 aaPredicted RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM51Q9NW97 253 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 SIP14410 1827 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 WDR81Q562E7 1941 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 BECN2A8MW95 431 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PMM2O15305 246 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TREHO43280 583 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 EXTL3O43909 919 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PPP1R37O75864 691 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ECM2O94769 699 aaPredicted RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PPM1AP35813 382 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 MATR3P43243 847 aaKnown RBP eCLIP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CLCN3P51790 818 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 NPEPPSP55786 919 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 MCL1Q07820 350 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 MAPK7Q13164 816 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 PDE12Q6L8Q7 609 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ARMCX5Q6P1M9 558 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 EPM2AIP1Q7L775 607 aaPredicted RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 FILIP1Q7Z7B0 1213 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 MRPL10Q7Z7H8 261 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ENOX1Q8TC92 643 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 HERVK_113Q902F9 699 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ANP32BQ92688 251 aaKnown RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 NLRP4Q96MN2 994 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF560Q96MR9 790 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 RPS6KC1Q96S38 1066 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 CCDC113Q9H0I3 377 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TSPYL2Q9H2G4 693 aaPredicted RBP5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TSPY26PQ9H489 355 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 GOLPH3LQ9H4A5 285 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM161AQ9NX61 479 aa5.65□□□□□ -1.5
LRIT3-201ENST00000327908 HNRNPDLO14979 420 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms