RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 RMND1Q9NWS8 449 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 TUBA8Q9NY65 449 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 MYH10P35580 1976 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 GAKO14976 1311 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 GDF11O95390 407 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 HSPA8P11142 646 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 AKR1B1P15121 316 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CHN1P15882 459 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 PTGER2P43116 358 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 GEMIN4P57678 1058 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CCSAPQ6IQ19 270 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CD302Q8IX05 232 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 RNF10Q8N5U6 811 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 MGARPQ8TDB4 240 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 RSPH1Q8WYR4 309 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CEP95Q96GE4 821 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC42Q96M95 316 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 DDX50Q9BQ39 737 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 IFIH1Q9BYX4 1025 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 SCOCQ9UIL1 159 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 FZD1Q9UP38 647 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 NFKBIEO00221 500 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 GSTA1P08263 222 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ATP6V1C1P21283 382 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 FECHP22830 423 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 GBP1P32455 592 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 PMS2P54278 862 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CXCL9Q07325 125 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 NR5A1Q13285 461 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 USP17L2Q6R6M4 530 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 PRMT1Q99873 361 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ATAD3AQ9NVI7 634 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CIDEBQ9UHD4 219 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 SSX2IPQ9Y2D8 614 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 TMA7Q9Y2S6 64 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 TDRKHQ9Y2W6 561 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 FRMPD2Q68DX3 1309 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 MYPNQ86TC9 1320 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CYP1A1P04798 512 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ITIH3Q06033 890 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 SULT2A1Q06520 285 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 DHX9Q08211 1270 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 TROAPQ12815 778 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 RCN2Q14257 317 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CFAP221Q4G0U5 840 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ZC2HC1CQ53FD0 456 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 PRAMEF18Q5VWM3 479 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 GRAMD4Q6IC98 578 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 NEK10Q6ZWH5 1172 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC84Q86UT8 332 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 MYO1HQ8N1T3 1032 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ATP6V0A1Q93050 837 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
SF3B2-201ENST00000322535 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
SF3B2-201ENST00000322535 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 BTBD18B2RXH4 712 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SLC26A4O43511 780 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 PLCG2P16885 1265 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TCP1P17987 556 aaKnown RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 HALP42357 657 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 LSAMPQ13449 338 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 UAP1Q16222 522 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SBK1Q52WX2 424 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TCP11X2Q5H9J9 407 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 GPKOWQ92917 476 aaPredicted RBP eCLIP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 PTPRN2Q92932 1015 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 EPSTI1Q96J88 318 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 DDX25Q9UHL0 483 aaKnown RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SRRM3A6NNA2 597 aaPredicted RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 RAD51CO43502 376 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 ALDH2P05091 517 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 ITGA2BP08514 1039 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TRIM14Q14142 442 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SEPT2Q15019 361 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SAFBQ15424 915 aaKnown RBP eCLIP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TMEM214Q6NUQ4 689 aaKnown RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 DLK2Q6UY11 383 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 ZC3H18Q86VM9 953 aaKnown RBP11.05□□□□□ -0.64
SF3B2-201ENST00000322535 NIM1KQ8IY84 436 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms