RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 RAD51CO43502 376 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FAM228BP0C875 321 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CHRNA3P32297 505 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 NT5C2P49902 561 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 JAK3P52333 1124 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ARL4CP56559 192 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PSMC1P62191 440 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 KRT76Q01546 638 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PDIA2Q13087 525 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FRMD5Q7Z6J6 570 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RPAINQ86UA6 219 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RHPN2Q8IUC4 686 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SYT2Q8N9I0 419 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SLC35G2Q8TBE7 412 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 KCNB2Q92953 911 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 NBPF3Q9H094 633 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 DBR1Q9UK59 544 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 TNS3Q68CZ2 1445 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SSU72P8A0A1W2PR75 194 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 GYG2O15488 501 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 KRT37O76014 449 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 NPEPPSP55786 919 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 STXBP2Q15833 593 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PRAMEF18Q5VWM3 479 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 IZUMO3Q5VZ72 239 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FBXO33Q7Z6M2 555 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 LRRN4CLQ8ND94 238 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PSPC1Q8WXF1 523 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CPA5Q8WXQ8 436 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 EXT2Q93063 718 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CHMP6Q96FZ7 201 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 AGPAT1Q99943 283 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SMYD3Q9H7B4 428 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RBAKQ9NYW8 714 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 LRRIQ1Q96JM4 1722 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RIMBP3CA6NJZ7 1639 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RIMBP3BA6NNM3 1639 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CCDC195A0A1B0GUA6 201 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FMO5P49326 533 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 EPHB1P54762 984 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PSMC5P62195 406 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CCNA1P78396 465 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 IL1RL1Q01638 556 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 MAP7Q14244 749 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 EPHA7Q15375 998 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PPP1R18Q6NYC8 613 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SRLQ86TD4 932 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ANKMY2Q8IV38 441 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PIP4K2CQ8TBX8 421 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FBXO41Q8TF61 875 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 DEPDC1BQ8WUY9 529 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ATP6V1E2Q96A05 226 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RBM41Q96IZ5 413 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CCT8L2Q96SF2 557 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 TRIM55Q9BYV6 548 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 POLR3FQ9H1D9 316 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 VPS11Q9H270 941 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SLITRK6Q9H5Y7 841 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 L2HGDHQ9H9P8 463 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 JMJD4Q9H9V9 463 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FBXO28Q9NVF7 368 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SLC9A2Q9UBY0 812 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 HPSEQ9Y251 543 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 UBE4BO95155 1302 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SLC37A4O43826 429 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 LDHAP00338 332 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 HMGCS2P54868 508 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 KRT17Q04695 432 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RNASELQ05823 741 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 FOXD4Q12950 439 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 EARS2Q5JPH6 523 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PLA2G4FQ68DD2 849 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 RWDD4Q6NW29 188 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CDC42EP5Q6NZY7 148 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 SLC30A10Q6XR72 485 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PDZD8Q8NEN9 1154 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 TMEM143Q96AN5 459 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 AGO2Q9UKV8 859 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
GAPVD1-203ENST00000312123 IQANK1A0A1B0GTG1 560 aa7.53□□□□□ -1.2
GAPVD1-203ENST00000312123 TARSL2A2RTX5 802 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-203ENST00000312123 PDHA1P08559 390 aa7.53□□□□□ -1.2
GAPVD1-203ENST00000312123 HOXA7P31268 230 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-203ENST00000312123 IRAK1P51617 712 aa7.53□□□□□ -1.2
GAPVD1-203ENST00000312123 C2CD6Q53TS8 623 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms