RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 EML4Q9HC35 981 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SYTL2Q9HCH5 934 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CEP72Q9P209 647 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 AP4S1Q9Y587 144 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 HEY1Q9Y5J3 304 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 XDHP47989 1333 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 KRT38O76015 456 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CDH2P19022 906 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 RAD23BP54727 409 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SNAP25P60880 206 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 GJC2Q5T442 439 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SYDE2Q5VT97 1194 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PPHLN1Q8NEY8 458 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 RBM41Q96IZ5 413 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF212Q9UDV6 495 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ANAPC7Q9UJX3 599 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 MYL1P05976 194 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PPP2R2AP63151 447 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ROR1Q01973 937 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CAV1Q03135 178 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 NFRKBQ6P4R8 1299 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF555Q8NEP9 628 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CNKSR1Q969H4 720 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 GCOM2Q9BZD3 368 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 WDR11Q9BZH6 1224 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 TRIM45Q9H8W5 580 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 SARS2Q9NP81 518 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CASS4Q9NQ75 786 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 OVOS2A0A0G2JMS6 1433 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 OVOS2A0A0J9YW53 1432 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 OVOS2Q6IE36 1432 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ERVK-7P63135 1459 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PRR23D1E9PI22 279 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PRR23D2P0DMB1 279 aaPredicted RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 AARSP49588 968 aaKnown RBP eCLIP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 KPNB1Q14974 876 aaKnown RBP5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PPP4R3CPQ6ZMV5 832 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ANO5Q75V66 913 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 ARMCX2Q7L311 632 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 VPS39Q96JC1 886 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 CATSPER2Q96P56 530 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 H7C0S8 307 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 DFFAO00273 331 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 RASSF9O75901 435 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PYGMP11217 842 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 GPS1Q13098 491 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 PSMD2Q13200 908 aa5.9□□□□□ -1.46
CPSF2-201ENST00000298875 WDR47O94967 919 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 GDF11O95390 407 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 MRPS15P82914 257 aaKnown RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 CDC37Q16543 378 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 RNF219Q5W0B1 726 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 PATL1Q86TB9 770 aaKnown RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 PIGOQ8TEQ8 1089 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ATXN7L3BQ96GX2 97 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 SNF8Q96H20 258 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ABHD8Q96I13 439 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 KDM4CQ9H3R0 1056 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 PRKAG2Q9UGJ0 569 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 AFF4Q9UHB7 1163 aaKnown RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 MYO3AQ8NEV4 1616 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 LRRC53A6NM62 1247 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 NCK2O43639 380 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 HOXA13P31271 388 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 FKBP3Q00688 224 aaKnown RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 LRRC63Q05C16 580 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 POTEAQ6S8J7 498 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 FAM180AQ6UWF9 173 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ELMOD1Q8N336 334 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 TTC8Q8TAM2 541 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 COA7Q96BR5 231 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 MKL2Q9ULH7 1088 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 CFAP69A5D8W1 941 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ENO4A6NNW6 628 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 APBA3O96018 575 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 CALB1P05937 261 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 KLHL38Q2WGJ6 581 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 CCNYL1Q8N7R7 359 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 BTBD6Q96KE9 485 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 USP44Q9H0E7 712 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 GREM2Q9H772 168 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ERCC6L2Q5T890 1561 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 RNF103-CHMP3A0A140T963 221 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 FAM25AB3EWG3 89 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 FAM25CB3EWG5 89 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 FAM25GB3EWG6 89 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 SUPT3HO75486 399 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 SKOR1P84550 965 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ALCAMQ13740 583 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 RASGRF1Q13972 1273 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 DEPDC1Q5TB30 811 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 ZBED8Q8IZ13 594 aa5.9□□□□□ -1.47
CPSF2-201ENST00000298875 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.9□□□□□ -1.47
CPSF2-201ENST00000298875 DYTNA2CJ06 578 aa5.89□□□□□ -1.47
CPSF2-201ENST00000298875 NFKBIAP25963 317 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms