RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TRIM49CP0CI26 452 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 ASIC4Q96FT7 647 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 RGL1Q9NZL6 768 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 DFFAO00273 331 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 PRKCBP05771 671 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 YAF2Q8IY57 180 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 DHX35Q9H5Z1 703 aaKnown RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 TRPC7Q9HCX4 862 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 KBTBD13C9JR72 458 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 COPEO14579 308 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 THOC1Q96FV9 657 aaKnown RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 EFHD1Q9BUP0 239 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 PPP1R9AQ9ULJ8 1098 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 ARID5BQ14865 1188 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 HADHAP40939 763 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 ANO4Q32M45 955 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 LCMT1Q9UIC8 334 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 PPP1R12AO14974 1030 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-201ENST00000293441 HEATR6Q6AI08 1181 aaKnown RBP18.4■□□□□ 0.54
SHANK1-201ENST00000293441 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 APOEP02649 317 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 RALAP11233 206 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 HDLBPQ00341 1268 aaKnown RBP18.4■□□□□ 0.54
SHANK1-201ENST00000293441 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 EPHA7Q15375 998 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 NAALADL2Q58DX5 795 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 CRLF3Q8IUI8 442 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 INTUQ9ULD6 942 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 GUCY1A2P33402 732 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 EIF3BP55884 814 aaKnown RBP18.4■□□□□ 0.54
SHANK1-201ENST00000293441 BAATQ14032 418 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-201ENST00000293441 HAUS6Q7Z4H7 955 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 ZNF560Q96MR9 790 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 SH2D3AQ9BRG2 576 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 VPS11Q9H270 941 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 PNPLA7Q6ZV29 1317 aa18.4■□□□□ 0.54
SHANK1-201ENST00000293441 DYNC1LI2O43237 492 aaPredicted RBP18.39■□□□□ 0.54
SHANK1-201ENST00000293441 KRT37O76014 449 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 UPP2O95045 317 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 SLC8A1P32418 973 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 VPS72Q15906 364 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 IMPG1Q17R60 797 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 RASSF3Q86WH2 238 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 ZBTB18Q99592 522 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 GTSE1Q9NYZ3 720 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 PLAAQ9Y263 795 aa18.39■□□□□ 0.54
SHANK1-201ENST00000293441 MIF4GDA9UHW6 222 aaKnown RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 SPATA2LQ8IUW3 424 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 ZNF70Q9UC06 446 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 AFF4Q9UHB7 1163 aaKnown RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 TMPRSS15P98073 1019 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 ALS2CLQ60I27 953 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 ATG9AQ7Z3C6 839 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 MAGEB5Q9BZ81 275 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 PSMD14O00487 310 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 NR1D1P20393 614 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 TMEM62Q0P6H9 643 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 CEP55Q53EZ4 464 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 GGA3Q9NZ52 723 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 CCDC188H7C350 402 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 C6orf222P0C671 652 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 NMT1P30419 496 aaKnown RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 SCG3Q8WXD2 468 aaKnown RBP18.39■□□□□ 0.53
SHANK1-201ENST00000293441 TUFT1Q9NNX1 390 aa18.39■□□□□ 0.53
SHANK1-201ENST00000293441 STMN1P16949 149 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 PPP4R4Q6NUP7 873 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 CDC42EP5Q6NZY7 148 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 KCNJ6P48051 423 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 ROR1Q01973 937 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 POU5F1BQ06416 359 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 CCDC138Q96M89 665 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 GGPS1O95749 300 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 CYP2B6P20813 491 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 KYAT1Q16773 422 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 KITP10721 976 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 ESRRAP11474 423 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-201ENST00000293441 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-201ENST00000293441 ABCB6Q9NP58 842 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 TMEM247A6NEH6 219 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 KLHL29Q96CT2 875 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 ZFYVE28Q9HCC9 887 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 DYRK4Q9NR20 520 aa18.38■□□□□ 0.53
SHANK1-201ENST00000293441 TADA2AO75478 443 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 EYA4O95677 639 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 EFNA5P52803 228 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TRMT10CQ7L0Y3 403 aaKnown RBP18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TAS2R42Q7RTR8 314 aa18.37■□□□□ 0.53
SHANK1-201ENST00000293441 TRAIPQ9BWF2 469 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms