RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SNRNP35Q16560 246 aaKnown RBP25.17■■□□□ 1.62
RAB40B-201ENST00000269347 CC2D1AQ6P1N0 951 aaPredicted RBP25.17■■□□□ 1.62
RAB40B-201ENST00000269347 MSANTD4Q8NCY6 345 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 KIFAP3Q92845 792 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 STK33Q9BYT3 514 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 HAPLN2Q9GZV7 340 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 FTCDO95954 541 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 CYP2C8P10632 490 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 XKR3Q5GH77 459 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 CCDC127Q96BQ5 260 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 ATP6V0A4Q9HBG4 840 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 FBXO40Q9UH90 709 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 OATP04181 439 aa25.16■■□□□ 1.62
RAB40B-201ENST00000269347 ALKBH5Q6P6C2 394 aaKnown RBP25.16■■□□□ 1.62
RAB40B-201ENST00000269347 SLC30A5Q8TAD4 765 aa25.16■■□□□ 1.62
RAB40B-201ENST00000269347 TAF1DQ9H5J8 278 aaPredicted RBP25.16■■□□□ 1.62
RAB40B-201ENST00000269347 ARHGAP28Q9P2N2 729 aa25.16■■□□□ 1.62
RAB40B-201ENST00000269347 GRID2IPA4D2P6 1211 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 LRRIQ3A6PVS8 624 aaPredicted RBP25.15■■□□□ 1.62
RAB40B-201ENST00000269347 KRT13P13646 458 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 VSNL1P62760 191 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 PTPROQ16827 1216 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 DPY19L2Q6NUT2 758 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 TRIM50Q86XT4 487 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 OSBPL9Q96SU4 736 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 PORCNQ9H237 461 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 ACP6Q9NPH0 428 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 CENPFP49454 3210 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 SIP14410 1827 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 GLRA2P23416 452 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 STAT1P42224 750 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 SMTNP53814 917 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 MAP2K1Q02750 393 aaPredicted RBP25.15■■□□□ 1.62
RAB40B-201ENST00000269347 C2orf54Q08AI8 447 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 GLYCTKQ8IVS8 523 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 NOX5Q96PH1 765 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 DHX33Q9H6R0 707 aaKnown RBP25.15■■□□□ 1.62
RAB40B-201ENST00000269347 TAS2R14Q9NYV8 317 aa25.15■■□□□ 1.62
RAB40B-201ENST00000269347 GGPS1O95749 300 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 TBC1D8O95759 1140 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 NAP1L1P55209 391 aaKnown RBP25.14■■□□□ 1.62
RAB40B-201ENST00000269347 PARD3BQ8TEW8 1205 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 COPS5Q92905 334 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 ZBTB9Q96C00 473 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 MS4A14Q96JA4 679 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 SUGCTQ9HAC7 445 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 ST7Q9NRC1 585 aa25.14■■□□□ 1.62
RAB40B-201ENST00000269347 DNA2P51530 1060 aa25.14■■□□□ 1.61
RAB40B-201ENST00000269347 MCCD1P59942 119 aaPredicted RBP25.14■■□□□ 1.61
RAB40B-201ENST00000269347 MRPS25P82663 173 aaKnown RBP25.14■■□□□ 1.61
RAB40B-201ENST00000269347 HSDL1Q3SXM5 330 aa25.14■■□□□ 1.61
RAB40B-201ENST00000269347 SLC20A1Q8WUM9 679 aa25.14■■□□□ 1.61
RAB40B-201ENST00000269347 HINFPQ9BQA5 517 aa25.14■■□□□ 1.61
RAB40B-201ENST00000269347 MAF1Q9H063 256 aa25.14■■□□□ 1.61
RAB40B-201ENST00000269347 UBE2TQ9NPD8 197 aaPredicted RBP25.14■■□□□ 1.61
RAB40B-201ENST00000269347 DNAJC25-GNG10A0A024R161 153 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 TTLL13PA6NNM8 815 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 RNF10Q8N5U6 811 aaKnown RBP25.13■■□□□ 1.61
RAB40B-201ENST00000269347 MCPH1Q8NEM0 835 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 U2AF1L4Q8WU68 220 aaKnown RBP25.13■■□□□ 1.61
RAB40B-201ENST00000269347 ZC3H15Q8WU90 426 aaKnown RBP25.13■■□□□ 1.61
RAB40B-201ENST00000269347 ZBTB45Q96K62 511 aaPredicted RBP25.13■■□□□ 1.61
RAB40B-201ENST00000269347 FBXL18Q96ME1 805 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 RAB21Q9UL25 225 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 PCDHGC5Q9Y5F6 944 aa25.13■■□□□ 1.61
RAB40B-201ENST00000269347 GLTPD2A6NH11 291 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 POLGP54098 1239 aaPredicted RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 LDLRAD1Q5T700 205 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 SCARA3Q6AZY7 606 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 FBXO16Q8IX29 292 aaPredicted RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 KREMEN1Q96MU8 473 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 EFCC1Q9HA90 598 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 BZW2Q9Y6E2 419 aaKnown RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 TMCO5BA8MYB1 307 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 FERP16591 822 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 NF2P35240 595 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 TCF7P36402 384 aaPredicted RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 MKRN3Q13064 507 aaKnown RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 TARBP2Q15633 366 aaKnown RBP25.12■■□□□ 1.61
RAB40B-201ENST00000269347 POMGNT1Q8WZA1 660 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 ZBTB10Q96DT7 871 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 PRDM10Q9NQV6 1147 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 PDGFCQ9NRA1 345 aa25.12■■□□□ 1.61
RAB40B-201ENST00000269347 HNRNPDLO14979 420 aaKnown RBP25.11■■□□□ 1.61
RAB40B-201ENST00000269347 MXI1P50539 228 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 RTP1P59025 263 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 ZBTB41Q5SVQ8 909 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 MAP1SQ66K74 1059 aaPredicted RBP25.11■■□□□ 1.61
RAB40B-201ENST00000269347 LMBRD2Q68DH5 695 aaPredicted RBP25.11■■□□□ 1.61
RAB40B-201ENST00000269347 C17orf75Q9HAS0 396 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 MAPK13O15264 365 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 DKC1O60832 514 aaKnown RBP eCLIP25.11■■□□□ 1.612e-8■■■■■ 48.7
RAB40B-201ENST00000269347 MARK3P27448 753 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 ARL2P36404 184 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 TMCO3Q6UWJ1 677 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 TAS1R2Q8TE23 839 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 MFSD14AQ96MC6 490 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 ALS2CR12Q96Q35 445 aa25.11■■□□□ 1.61
RAB40B-201ENST00000269347 NIFKQ9BYG3 293 aaKnown RBP25.11■■□□□ 1.61
RAB40B-201ENST00000269347 ZNF408Q9H9D4 720 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms