RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ATP5DP30049 168 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 HOXD13P35453 343 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 MXRA7P84157 204 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 MGAT5Q09328 741 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 CCDC15Q0P6D6 951 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 CWF19L1Q69YN2 538 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 POTEGQ6S5H5 508 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 MFN1Q8IWA4 741 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 TGS1Q96RS0 853 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 BTG4Q9NY30 223 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 PTPN22Q9Y2R2 807 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 PCDHA3Q9Y5H8 950 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 PFASO15067 1338 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 ABLIM1O14639 778 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 GNAT1P11488 350 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 RAD23BP54727 409 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 ART4Q93070 314 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 SERPINB12Q96P63 405 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 COG5Q9UP83 839 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 ALG6Q9Y672 507 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 GTPBP10A4D1E9 387 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 CLIC2O15247 247 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 MED24O75448 989 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 ATP6V1C1P21283 382 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 RFC4P35249 363 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 DRAP1Q14919 205 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 PARP6Q2NL67 630 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 APLFQ8IW19 511 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 CCDC105Q8IYK2 499 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 SLC17A8Q8NDX2 589 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 COQ9O75208 318 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ACSL3O95573 720 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 CTNNA2P26232 953 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 GIT2Q14161 759 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 CGB2Q6NT52 195 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 PIGOQ8TEQ8 1089 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 STK32AQ8WU08 396 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 KRT35Q92764 455 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ZMYND8Q9ULU4 1186 aaPredicted RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ANKRD62A6NC57 917 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 MIF4GDA9UHW6 222 aaKnown RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 TNFAIP3P21580 790 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 STX2P32856 288 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 STAT3P40763 770 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 CMPK2Q5EBM0 449 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ARMC3Q5W041 872 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ZNF513Q8N8E2 541 aaPredicted RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 REEP2Q9BRK0 252 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 DDX23Q9BUQ8 820 aaKnown RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 STK33Q9BYT3 514 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 CDC42EP4Q9H3Q1 356 aaKnown RBP16.08■□□□□ 0.16
XRCC1-201ENST00000262887 CYP39A1Q9NYL5 469 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
XRCC1-201ENST00000262887 ASTN1O14525 1302 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 PEX11AO75192 247 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 NPTXRO95502 500 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 GH1P01241 217 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 PDHA1P08559 390 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 ALAS1P13196 640 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 ROR2Q01974 943 aaKnown RBP16.07■□□□□ 0.16
XRCC1-201ENST00000262887 CALCOCO2Q13137 446 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 ACVR2BQ13705 512 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 SEL1L2Q5TEA6 688 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 INTS8Q75QN2 995 aaKnown RBP16.07■□□□□ 0.16
XRCC1-201ENST00000262887 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-201ENST00000262887 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 SPDYE5A6NIY4 337 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 ATP5HO75947 161 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 TPBGLP0DKB5 382 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
XRCC1-201ENST00000262887 GSTO1P78417 241 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.167e-6■■□□□ 14.2
XRCC1-201ENST00000262887 LBRQ14739 615 aaKnown RBP16.07■□□□□ 0.16
XRCC1-201ENST00000262887 MTFR1Q15390 333 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 RHOT2Q8IXI1 618 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 AGGF1Q8N302 714 aaeCLIP16.07■□□□□ 0.168e-6■■■□□ 14.7
XRCC1-201ENST00000262887 TEKT4Q8WW24 435 aa16.07■□□□□ 0.16
XRCC1-201ENST00000262887 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms