RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 C11orf63Q6NUN7 778 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 MIER3Q7Z3K6 550 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 TMEM174Q8WUU8 243 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 MAGOHBQ96A72 148 aaKnown RBP16.46■□□□□ 0.23
DDX56-201ENST00000258772 LRRC4CQ9HCJ2 640 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 TMOD2Q9NZR1 351 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 BRWD3Q6RI45 1802 aa16.46■□□□□ 0.22
DDX56-201ENST00000258772 YDJCA8MPS7 323 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 MIF4GDA9UHW6 222 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 P4HBP07237 508 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 MAPTP10636 758 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 GCLMP48507 274 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 DRG2P55039 364 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 EIF3BP55884 814 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 GPC5P78333 572 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 C1orf220Q5T0J3 134 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 AADACL2Q6P093 401 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 JAMLQ86YT9 394 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 ACCSQ96QU6 501 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 CBWD1Q9BRT8 395 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 FBXO28Q9NVF7 368 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 PFASO15067 1338 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 CLRN2A0PK11 232 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 FNTAP49354 379 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 IFFO1Q0D2I5 559 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 ALCAMQ13740 583 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 C6orf89Q6UWU4 347 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 RPUSD2Q8IZ73 545 aaKnown RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 UBL4BQ8N7F7 174 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 C3orf20Q8ND61 904 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 DEFB129Q9H1M3 183 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 KCNH7Q9NS40 1196 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
DDX56-201ENST00000258772 CAPN7Q9Y6W3 813 aa16.45■□□□□ 0.22
DDX56-201ENST00000258772 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 KIAA0391O15091 583 aaKnown RBP16.44■□□□□ 0.22
DDX56-201ENST00000258772 RTN2O75298 545 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 FSBPO95073 299 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PAEPP09466 180 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 FAM151AQ8WW52 585 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 KRT35Q92764 455 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 EPB41L4BQ9H329 900 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDX56-201ENST00000258772 SNX24Q9Y343 169 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 ZHX2Q9Y6X8 837 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 DHX15O43143 795 aaKnown RBP16.44■□□□□ 0.22
DDX56-201ENST00000258772 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PTGIRP43119 386 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PLTPP55058 493 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 IFT88Q13099 833 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 ICE2Q659A1 982 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 ZSWIM2Q8NEG5 633 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 RAPGEF5Q92565 580 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 TLCD1Q96CP7 247 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PSMD1Q99460 953 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 HSPBP1Q9NZL4 362 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 DBR1Q9UK59 544 aaKnown RBP16.44■□□□□ 0.22
DDX56-201ENST00000258772 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
DDX56-201ENST00000258772 PHF2O75151 1096 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 PLS3P13797 630 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 HSPA6P17066 643 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 CHRNA3P32297 505 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 USP8P40818 1118 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 MARCKSL1P49006 195 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 RARRES1P49788 294 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 PEX5P50542 639 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 HSD17B4P51659 736 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 GRIPAP1Q4V328 841 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 ZNF746Q6NUN9 644 aaPredicted RBP16.43■□□□□ 0.22
DDX56-201ENST00000258772 ZDHHC24Q6UX98 284 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 PRELID2Q8N945 189 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 FBXO25Q8TCJ0 367 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 C18orf8Q96DM3 657 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 PCDHB18PQ96TA0 734 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 PABPC3Q9H361 631 aaKnown RBP16.43■□□□□ 0.22
DDX56-201ENST00000258772 RASAL2Q9UJF2 1139 aa16.43■□□□□ 0.22
DDX56-201ENST00000258772 TMEM110-MUSTN1A8MSY1 372 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CAND2O75155 1236 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 SGPL1O95470 568 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 NUDT17P0C025 328 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 GZMAP12544 262 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CHRNB2P17787 502 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 COMTP21964 271 aa16.42■□□□□ 0.22
DDX56-201ENST00000258772 CHRNA5P30532 468 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms