RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 LBHD1Q9BQE6 289 aaPredicted RBP18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 C9orf72Q96LT7 481 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 CYTH2Q99418 400 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 CAPN6Q9Y6Q1 641 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 RAD51CO43502 376 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 FMO5P49326 533 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 TAF11Q15544 211 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 DNAAF5Q86Y56 855 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 SLITRK6Q9H5Y7 841 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
SLC1A4-201ENST00000234256 FAM205AQ6ZU69 1335 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 DMGDHQ9UI17 866 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 TECPR2O15040 1411 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 GRID2IPA4D2P6 1211 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 SPAG7O75391 227 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 LDHAP00338 332 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 NCF2P19878 526 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 GARSP41250 739 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 SEC23AQ15436 765 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 EPM2AIP1Q7L775 607 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 ANKS1AQ92625 1134 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 HVCN1Q96D96 273 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 SLC5A4Q9NY91 659 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 FRMPD1Q5SYB0 1578 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 PSMD14O00487 310 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 CASQ2O14958 399 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 RXRBP28702 533 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 NPEPPSP55786 919 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 PPM1NQ8N819 430 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 HDAC11Q96DB2 347 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 ALG13Q9NP73 1137 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 RBAKQ9NYW8 714 aaPredicted RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 PPARGC1AQ9UBK2 798 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 MAD2L2Q9UI95 211 aa18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 PDS5AQ29RF7 1337 aaKnown RBP18.29■□□□□ 0.52
SLC1A4-201ENST00000234256 CFLARO15519 480 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CASP7P55210 303 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 DBN1Q16643 649 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CATSPER4Q7RTX7 472 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 RHPN2Q8IUC4 686 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 MYO1EQ12965 1108 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 DALRD3Q5D0E6 543 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CCHCR1Q8TD31 782 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 N4BP2L2Q92802 583 aaPredicted RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 POLR3FQ9H1D9 316 aaPredicted RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CCDC68Q9H2F9 335 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 DIS3Q9Y2L1 958 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 USP32Q8NFA0 1604 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 PALM3A6NDB9 673 aaPredicted RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 SPOUT1Q5T280 376 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 ZBED8Q8IZ13 594 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 PSPC1Q8WXF1 523 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 RBM41Q96IZ5 413 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 FUT8Q9BYC5 575 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 TXLNGQ9NUQ3 528 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 APEX2Q9UBZ4 518 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 RSPH10B2B2RC85 870 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 RSPH10BP0C881 870 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 PSMC1P62191 440 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CCNA1P78396 465 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 NFIAQ12857 509 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 RBBP5Q15291 538 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 CPA5Q8WXQ8 436 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 ZIM3Q96PE6 472 aa18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
SLC1A4-201ENST00000234256 MAPK13O15264 365 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 XPOTO43592 962 aaKnown RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 ZBTB7AO95365 584 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 YWHABP31946 246 aaKnown RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 HMGCS2P54868 508 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 ARL4CP56559 192 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 KIF22Q14807 665 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 PLA2G4FQ68DD2 849 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 SRLQ86TD4 932 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 MYLK4Q86YV6 388 aaPredicted RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 ERGIC2Q96RQ1 377 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 BAATQ14032 418 aaPredicted RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 ZC3H18Q86VM9 953 aaKnown RBP18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 CHMP6Q96FZ7 201 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 STK33Q9BYT3 514 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 TLK1Q9UKI8 766 aa18.27■□□□□ 0.52
SLC1A4-201ENST00000234256 PDIA2Q13087 525 aaKnown RBP18.27■□□□□ 0.51
SLC1A4-201ENST00000234256 PKN1Q16512 942 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms