RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 LRP10Q7Z4F1 713 aa4.5□□□□□ -1.69
VPS8-228ENST00000628962 ZBTB38Q8NAP3 1195 aaPredicted RBP4.5□□□□□ -1.69
VPS8-228ENST00000628962 ERCC4Q92889 916 aaPredicted RBP4.5□□□□□ -1.69
VPS8-228ENST00000628962 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
VPS8-228ENST00000628962 SRPK1Q96SB4 655 aaKnown RBP4.5□□□□□ -1.69
VPS8-228ENST00000628962 CDC6Q99741 560 aa4.5□□□□□ -1.69
VPS8-228ENST00000628962 CELF4Q9BZC1 486 aaKnown RBP4.5□□□□□ -1.69
VPS8-228ENST00000628962 SETD1BQ9UPS6 1966 aaKnown RBP4.5□□□□□ -1.69
VPS8-228ENST00000628962 hCG_2014768A0A024R1R8 64 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 SLC12A8A0AV02 714 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 STC2O76061 302 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 PRLP01236 227 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 LAG3P18627 525 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
VPS8-228ENST00000628962 HSD3B2P26439 372 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 ZEB1P37275 1124 aaPredicted RBP4.49□□□□□ -1.69
VPS8-228ENST00000628962 SERINC3Q13530 473 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 SPIDRQ14159 915 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 KRT40Q6A162 431 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 OVCH1Q7RTY7 1134 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 APBB1IPQ7Z5R6 666 aaPredicted RBP4.49□□□□□ -1.69
VPS8-228ENST00000628962 CMTM4Q8IZR5 234 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 MKL1Q969V6 931 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 ARL8AQ96BM9 186 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 SERHL2Q9H4I8 314 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
VPS8-228ENST00000628962 SIRPGQ9P1W8 387 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 COQ6Q9Y2Z9 468 aa4.49□□□□□ -1.69
VPS8-228ENST00000628962 AHRRA9YTQ3 701 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 LPXNO60711 386 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 HIP1RO75146 1068 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 RECQL4O94761 1208 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 SCAF4O95104 1147 aaKnown RBP4.48□□□□□ -1.69
VPS8-228ENST00000628962 TYRP1P17643 537 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 GNAT2P19087 354 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 HK1P19367 917 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 PTTG1IPP53801 180 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 RASGRF1Q13972 1273 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 RNF187Q5TA31 235 aaPredicted RBP4.48□□□□□ -1.69
VPS8-228ENST00000628962 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
VPS8-228ENST00000628962 EXOC2Q96KP1 924 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 WDR92Q96MX6 357 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 HAPLN2Q9GZV7 340 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 POLR3BQ9NW08 1133 aaPredicted RBP4.48□□□□□ -1.69
VPS8-228ENST00000628962 SYBUQ9NX95 663 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 KCMF1Q9P0J7 381 aa4.48□□□□□ -1.69
VPS8-228ENST00000628962 CCDC85CA6NKD9 419 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 TMEM200CA6NKL6 621 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 ZNF185O15231 689 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 ZBTB48P10074 688 aaPredicted RBP4.47□□□□□ -1.69
VPS8-228ENST00000628962 USP14P54578 494 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 IGBP1P78318 339 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 SLC6A3Q01959 620 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 ROM1Q03395 351 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 PTPROQ16827 1216 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 LONRF2Q1L5Z9 754 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 EPHA10Q5JZY3 1008 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 FBXO42Q6P3S6 717 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 GSTCDQ8NEC7 633 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 ZCRB1Q8TBF4 217 aaKnown RBP4.47□□□□□ -1.69
VPS8-228ENST00000628962 E2F7Q96AV8 911 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 DEPDC7Q96QD5 511 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 SLC46A2Q9BY10 475 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 KCNH6Q9H252 994 aa4.47□□□□□ -1.69
VPS8-228ENST00000628962 C14orf93Q9H972 538 aaKnown RBP4.47□□□□□ -1.69
VPS8-228ENST00000628962 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
VPS8-228ENST00000628962 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.69
VPS8-228ENST00000628962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.46□□□□□ -1.7
VPS8-228ENST00000628962 PDPK1O15530 556 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 MTSS1O43312 755 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 GYPEP15421 78 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 KIR2DL3P43628 341 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 FNTBP49356 437 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 NPEPPSP55786 919 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 ANAPC15P60006 121 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 FAM189BP81408 668 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 IRF9Q00978 393 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 PRR16Q569H4 304 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 BMP8AQ7Z5Y6 402 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 ARHGEF19Q8IW93 802 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
VPS8-228ENST00000628962 DYDC2Q96IM9 177 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 MAML3Q96JK9 1138 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 IPO9Q96P70 1041 aaKnown RBP4.46□□□□□ -1.7
VPS8-228ENST00000628962 DHRS4Q9BTZ2 278 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 WDR11Q9BZH6 1224 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 CCDC113Q9H0I3 377 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 SLC52A2Q9HAB3 445 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 SFMBT1Q9UHJ3 866 aa4.46□□□□□ -1.7
VPS8-228ENST00000628962 EPN1Q9Y6I3 576 aaPredicted RBP4.46□□□□□ -1.7
VPS8-228ENST00000628962 ENPP3O14638 875 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 FAM153BP0C7A2 387 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
VPS8-228ENST00000628962 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 CCDC62Q6P9F0 684 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 OTOP1Q7RTM1 612 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms