RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 XKR9Q5GH70 373 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 TMC7Q7Z402 723 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 ZNF579Q8NAF0 562 aaKnown RBP21.45■■□□□ 1.02
ATG4B-226ENST00000625810 PSPC1Q8WXF1 523 aaKnown RBP21.45■■□□□ 1.02
ATG4B-226ENST00000625810 TMEM143Q96AN5 459 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 ZSWIM4Q9H7M6 989 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 NGRNQ9NPE2 291 aaKnown RBP21.45■■□□□ 1.02
ATG4B-226ENST00000625810 BMP2KQ9NSY1 1161 aaPredicted RBP21.45■■□□□ 1.02
ATG4B-226ENST00000625810 LOC730098B7Z3J9 87 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 SRGAP2BP0DMP2 458 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 ALDH7A1P49419 539 aaKnown RBP21.44■■□□□ 1.02
ATG4B-226ENST00000625810 CYP4A11Q02928 519 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 CTTNQ14247 550 aaKnown RBP21.44■■□□□ 1.02
ATG4B-226ENST00000625810 HFE2Q6ZVN8 426 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 TPH2Q8IWU9 490 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 NSUN7Q8NE18 718 aaKnown RBP21.44■■□□□ 1.02
ATG4B-226ENST00000625810 TCP11Q8WWU5 503 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 PRPF31Q8WWY3 499 aaKnown RBP21.44■■□□□ 1.02
ATG4B-226ENST00000625810 TRAIPQ9BWF2 469 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 DHX33Q9H6R0 707 aaKnown RBP21.44■■□□□ 1.02
ATG4B-226ENST00000625810 FAM105AQ9NUU6 356 aa21.44■■□□□ 1.02
ATG4B-226ENST00000625810 HIDE1A8MVS5 230 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 RAB27AP51159 221 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 CBX2Q14781 532 aaPredicted RBP21.43■■□□□ 1.02
ATG4B-226ENST00000625810 CALCRLQ16602 461 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 GLB1LQ6UWU2 654 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 TMEM184AQ6ZMB5 413 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 SLC39A11Q8N1S5 342 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 RSPH1Q8WYR4 309 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 SUSD6Q92537 303 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 TNFRSF25Q93038 417 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 LPPQ93052 612 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 IFT122Q9HBG6 1241 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 PCDHA12Q9UN75 941 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 PIEZO1Q92508 2521 aa21.43■■□□□ 1.02
ATG4B-226ENST00000625810 NT5C1B-RDH14C9J2C7 533 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 GAS2O43903 313 aaKnown RBP21.42■■□□□ 1.02
ATG4B-226ENST00000625810 JAK2O60674 1132 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 CA8P35219 290 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 BCAR1P56945 870 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 SPIRE1Q08AE8 756 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 LAMTOR4Q0VGL1 99 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 BMS1Q14692 1282 aaKnown RBP21.42■■□□□ 1.02
ATG4B-226ENST00000625810 EMC2Q15006 297 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 SRGAP1Q7Z6B7 1085 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 DIS3L2Q8IYB7 885 aaKnown RBP21.42■■□□□ 1.02
ATG4B-226ENST00000625810 PGBD4Q96DM1 585 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 TMEM169Q96HH4 297 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 PHF7Q9BWX1 381 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-226ENST00000625810 INPP5FQ9Y2H2 1132 aa21.42■■□□□ 1.02
ATG4B-226ENST00000625810 ZBTB39O15060 712 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 ASAP2O43150 1006 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 ZC3H11AO75152 810 aaKnown RBP eCLIP21.41■■□□□ 1.02
ATG4B-226ENST00000625810 TECP42680 631 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 RNASELQ05823 741 aaKnown RBP21.41■■□□□ 1.02
ATG4B-226ENST00000625810 SMC1AQ14683 1233 aaKnown RBP21.41■■□□□ 1.02
ATG4B-226ENST00000625810 NOMO2Q5JPE7 1267 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 LLGL2Q6P1M3 1020 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 EDAQ92838 391 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 MTRQ99707 1265 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 EIF2AK1Q9BQI3 630 aaKnown RBP21.41■■□□□ 1.02
ATG4B-226ENST00000625810 S1PR5Q9H228 398 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 AGPAT5Q9NUQ2 364 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 TECTAO75443 2155 aa21.41■■□□□ 1.02
ATG4B-226ENST00000625810 CARNS1A5YM72 827 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 ZNF623O75123 536 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 SLITRK3O94933 977 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 TXKP42681 527 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 ANKRD54Q6NXT1 300 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 SYCE2Q6PIF2 218 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 RNF149Q8NC42 400 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 CCDC43Q96MW1 224 aaKnown RBP21.4■■□□□ 1.02
ATG4B-226ENST00000625810 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
ATG4B-226ENST00000625810 PCDHB2Q9Y5E7 798 aa21.4■■□□□ 1.02
ATG4B-226ENST00000625810 ZNF318Q5VUA4 2279 aa21.39■■□□□ 1.02
ATG4B-226ENST00000625810 NEMFO60524 1076 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 OFD1O75665 1012 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 SEC24BO95487 1268 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.01
ATG4B-226ENST00000625810 FERMT3Q86UX7 667 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 MRPL43Q8N983 215 aaKnown RBP21.39■■□□□ 1.01
ATG4B-226ENST00000625810 TMEM87AQ8NBN3 555 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 RPGRIP1Q96KN7 1286 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 GBP3Q9H0R5 595 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 TBC1D13Q9NVG8 400 aa21.39■■□□□ 1.01
ATG4B-226ENST00000625810 C2orf71A6NGG8 1288 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 MEIS3P2A8K0S8 358 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 ERLIN2O94905 339 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 CXCL14O95715 111 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 ATP2B1P20020 1258 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 MXD4Q14582 209 aaPredicted RBP21.38■■□□□ 1.01
ATG4B-226ENST00000625810 URGCPQ8TCY9 931 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 APOL5Q9BWW9 433 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 NRDE2Q9H7Z3 1164 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 MINDY3Q9H8M7 445 aa21.38■■□□□ 1.01
ATG4B-226ENST00000625810 ARID2Q68CP9 1835 aa21.37■■□□□ 1.01
ATG4B-226ENST00000625810 GUCY1B3Q02153 619 aa21.37■■□□□ 1.01
ATG4B-226ENST00000625810 NCBP1Q09161 790 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms