RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
TRIO-224ENST00000620511 GINS2Q9Y248 185 aa10.62□□□□□ -0.71
TRIO-224ENST00000620511 SQORQ9Y6N5 450 aa10.62□□□□□ -0.71
TRIO-224ENST00000620511 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 TTC3P53804 2025 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 MGEA5O60502 916 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 PLS3P13797 630 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 CD52P31358 61 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 NAMPTP43490 491 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 PEX3P56589 373 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 AMHR2Q16671 573 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 TSHZ1Q6ZSZ6 1077 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 DEFB128Q7Z7B8 93 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 RTN4RL1Q86UN2 441 aaPredicted RBP10.61□□□□□ -0.71
TRIO-224ENST00000620511 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 TMEM199Q8N511 208 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 NLRP7Q8WX94 980 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 LINC01599Q8WXQ3 324 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 KCNN1Q92952 543 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 PYM1Q9BRP8 204 aaKnown RBP10.61□□□□□ -0.71
TRIO-224ENST00000620511 STRA6Q9BX79 667 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 FGFBP2Q9BYJ0 223 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 BLZF1Q9H2G9 400 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 IL23AQ9NPF7 189 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 DACT1Q9NYF0 836 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 PADI3Q9ULW8 664 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 ST3GAL5Q9UNP4 418 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 CHD9Q3L8U1 2897 aa10.61□□□□□ -0.71
TRIO-224ENST00000620511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
TRIO-224ENST00000620511 PARNO95453 639 aaKnown RBP10.6□□□□□ -0.71
TRIO-224ENST00000620511 RFC2P35250 354 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 NCKAP1LP55160 1127 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 FPGSQ05932 587 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 MBTD1Q05BQ5 628 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 DPYDQ12882 1025 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 TMEM161BQ8NDZ6 487 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 CNNM3Q8NE01 707 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 GLIS3Q8NEA6 775 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 HPS3Q969F9 1004 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■■■□□ 15.7
TRIO-224ENST00000620511 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
TRIO-224ENST00000620511 FZD8Q9H461 694 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 C17orf75Q9HAS0 396 aa10.6□□□□□ -0.71
TRIO-224ENST00000620511 LRRIQ4A6NIV6 560 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 M0QZ92 97 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 SLC16A4O15374 487 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 PPP1R37O75864 691 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 MAPTP10636 758 aaKnown RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 NMT1P30419 496 aaKnown RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 HOXA11P31270 313 aaPredicted RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 CASP5P51878 434 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 COASYQ13057 564 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 DSC3Q14574 896 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 RASIP1Q5U651 963 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 ZNF365Q70YC5 407 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 SRGAP1Q7Z6B7 1085 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 SFR1Q86XK3 245 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 ELOA2Q8IYF1 753 aaPredicted RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 SPATA20Q8TB22 786 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
TRIO-224ENST00000620511 PARVGQ9HBI0 331 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
TRIO-224ENST00000620511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.58□□□□□ -0.72
TRIO-224ENST00000620511 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 B4GALT5O43286 388 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
TRIO-224ENST00000620511 TSPAN1O60635 241 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 RPS6KA5O75582 802 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 HOXD13P35453 343 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 AMPD3Q01432 767 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 PPIGQ13427 754 aaKnown RBP eCLIP10.58□□□□□ -0.729e-7■■■□□ 14.9
TRIO-224ENST00000620511 PNOCQ13519 176 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 TFDP1Q14186 410 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 ODR4Q5SWX8 454 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 C9orf50Q5SZB4 431 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 ZNF720Q7Z2F6 126 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 MYCT1Q8N699 235 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 TRIM44Q96DX7 344 aaPredicted RBP10.58□□□□□ -0.72
TRIO-224ENST00000620511 IFT74Q96LB3 600 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 IKZF4Q9H2S9 585 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 KMT5AQ9NQR1 393 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 OLFML3Q9NRN5 406 aa10.58□□□□□ -0.72
TRIO-224ENST00000620511 PANK4Q9NVE7 773 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms