RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 CXCL9Q07325 125 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 STK4Q13043 487 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 CCNYQ8ND76 341 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 ACER1Q8TDN7 264 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 ANKEF1Q9NU02 776 aa13.15□□□□□ -0.31
CYFIP1-207ENST00000617556 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 DDTLA6NHG4 134 aaPredicted RBP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 GNA15P30679 374 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 CIITAP33076 1130 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 ARPP19P56211 112 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 UHMK1Q8TAS1 419 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 NFAT5O94916 1531 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 MAGEB2O15479 319 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 TJP3O95049 919 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 SCP2P22307 547 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 CUL1Q13616 776 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 EMC2Q15006 297 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 ARHGEF18Q6ZSZ5 1173 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 PARD6BQ9BYG5 372 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 FGGP02679 453 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 ECE1P42892 770 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 CCL15Q16663 113 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 RIOX1Q9H6W3 641 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 ASNSD1Q9NWL6 643 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 PIK3C2AO00443 1686 aa13.14□□□□□ -0.31
CYFIP1-207ENST00000617556 GMNNO75496 209 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 PRKCEQ02156 737 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 NTRK3Q16288 839 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 DPF2Q92785 391 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 CAPS2Q9BXY5 557 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 INHBAP08476 426 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 BACE1P56817 501 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 TAAR1Q96RJ0 339 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 AP1M1Q9BXS5 423 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 MSH4O15457 936 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ASAP2O43150 1006 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZMYND10O75800 440 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 MUTP22033 750 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 PPP4R1Q8TF05 950 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 HVCN1Q96D96 273 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ACTN1P12814 892 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 INPP5BP32019 993 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 STMN2Q93045 179 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 PODXLO00592 558 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 SLC37A4O43826 429 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 SREBF1P36956 1147 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
CYFIP1-207ENST00000617556 CPP00450 1065 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 MYBP10242 640 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 NR1I3Q14994 352 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF560Q96MR9 790 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 SHMT1P34896 483 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF131P52739 623 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 TSPY1Q01534 308 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 MRC1P22897 1456 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 GOLGA8CPA6NN73 597 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 SEC31AO94979 1220 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF18P17022 549 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 KCNJ6P48051 423 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 TTC13Q8NBP0 860 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 IDI2Q9BXS1 227 aa13.12□□□□□ -0.31
CYFIP1-207ENST00000617556 CCDC68Q9H2F9 335 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms