RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CEP170P1Q96L14 293 aa19.9■□□□□ 0.78
SSBP1-215ENST00000612337 IFT122Q9HBG6 1241 aa19.9■□□□□ 0.78
SSBP1-215ENST00000612337 GJB4Q9NTQ9 266 aa19.9■□□□□ 0.78
SSBP1-215ENST00000612337 FAM105AQ9NUU6 356 aa19.9■□□□□ 0.78
SSBP1-215ENST00000612337 WRAP73Q9P2S5 460 aaPredicted RBP19.9■□□□□ 0.78
SSBP1-215ENST00000612337 COL4A3BPQ9Y5P4 624 aa19.9■□□□□ 0.78
SSBP1-215ENST00000612337 NT5C1B-RDH14C9J2C7 533 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 CTDNEP1O95476 244 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 POLGP54098 1239 aaPredicted RBP19.89■□□□□ 0.77
SSBP1-215ENST00000612337 EPHA7Q15375 998 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 GLB1LQ6UWU2 654 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 TRIM67Q6ZTA4 783 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 C4orf19Q8IY42 314 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 ZNF579Q8NAF0 562 aaKnown RBP19.89■□□□□ 0.77
SSBP1-215ENST00000612337 WASF1Q92558 559 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 CASP10Q92851 521 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 LXNQ9BS40 222 aa19.89■□□□□ 0.77
SSBP1-215ENST00000612337 DHX33Q9H6R0 707 aaKnown RBP19.89■□□□□ 0.77
SSBP1-215ENST00000612337 ORC3Q9UBD5 711 aaPredicted RBP19.89■□□□□ 0.77
SSBP1-215ENST00000612337 MARCH6O60337 910 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 ZC3H11AO75152 810 aaKnown RBP eCLIP19.88■□□□□ 0.77
SSBP1-215ENST00000612337 RFC5P40937 340 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 ZXDAP98168 799 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 BMS1Q14692 1282 aaKnown RBP19.88■□□□□ 0.77
SSBP1-215ENST00000612337 ANKRD1Q15327 319 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 NOMO2Q5JPE7 1267 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 BMP8AQ7Z5Y6 402 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 PRPF31Q8WWY3 499 aaKnown RBP19.88■□□□□ 0.77
SSBP1-215ENST00000612337 PSPC1Q8WXF1 523 aaKnown RBP19.88■□□□□ 0.77
SSBP1-215ENST00000612337 AGPAT5Q9NUQ2 364 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 TBC1D13Q9NVG8 400 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 HCFC2Q9Y5Z7 792 aa19.88■□□□□ 0.77
SSBP1-215ENST00000612337 MEIS3P2A8K0S8 358 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 GAS2O43903 313 aaKnown RBP19.87■□□□□ 0.77
SSBP1-215ENST00000612337 DTNBO60941 627 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 CLASP2O75122 1294 aaKnown RBP19.87■□□□□ 0.77
SSBP1-215ENST00000612337 OFD1O75665 1012 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 NEFLP07196 543 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 YWHABP31946 246 aaKnown RBP19.87■□□□□ 0.77
SSBP1-215ENST00000612337 SPIRE1Q08AE8 756 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 LONRF3Q496Y0 759 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 TPRNQ4KMQ1 711 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 EARS2Q5JPH6 523 aaKnown RBP19.87■□□□□ 0.77
SSBP1-215ENST00000612337 OTUD6AQ7L8S5 288 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 SRGAP1Q7Z6B7 1085 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 TMEM173Q86WV6 379 aaPredicted RBP19.87■□□□□ 0.77
SSBP1-215ENST00000612337 SLFN12Q8IYM2 578 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 VPS52Q8N1B4 723 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 TMEM143Q96AN5 459 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 PGBD4Q96DM1 585 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 IGSF21Q96ID5 467 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 FBXL18Q96ME1 805 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 APOL5Q9BWW9 433 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 ZBP1Q9H171 429 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 NRDE2Q9H7Z3 1164 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 PCDHB2Q9Y5E7 798 aa19.87■□□□□ 0.77
SSBP1-215ENST00000612337 ZDBF2Q9HCK1 2354 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 TMEM221A6NGB7 291 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 M0R296 226 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 BAG4O95429 457 aaKnown RBP19.86■□□□□ 0.77
SSBP1-215ENST00000612337 CXCL14O95715 111 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 GALTP07902 379 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 KRT2P35908 639 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 AK2P54819 239 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 LAMTOR4Q0VGL1 99 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 NCAPH2Q6IBW4 605 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 DDX53Q86TM3 631 aaKnown RBP19.86■□□□□ 0.77
SSBP1-215ENST00000612337 TCP11Q8WWU5 503 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 ZSWIM4Q9H7M6 989 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 BRMS1Q9HCU9 246 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 RGL1Q9NZL6 768 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 INPP5FQ9Y2H2 1132 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 IRAK3Q9Y616 596 aa19.86■□□□□ 0.77
SSBP1-215ENST00000612337 SRGAP2CP0DJJ0 459 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 CTSAP10619 480 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 FDPSP14324 419 aaKnown RBP19.85■□□□□ 0.77
SSBP1-215ENST00000612337 HOXA11P31270 313 aaPredicted RBP19.85■□□□□ 0.77
SSBP1-215ENST00000612337 CA8P35219 290 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 RNASELQ05823 741 aaKnown RBP19.85■□□□□ 0.77
SSBP1-215ENST00000612337 ITIH3Q06033 890 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 NR5A1Q13285 461 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 GIT2Q14161 759 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 EMC2Q15006 297 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 AGMOQ6ZNB7 445 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 MRPL10Q7Z7H8 261 aaKnown RBP19.85■□□□□ 0.77
SSBP1-215ENST00000612337 TNFRSF25Q93038 417 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 DYDC2Q96IM9 177 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 ADAM7Q9H2U9 754 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 MINDY3Q9H8M7 445 aa19.85■□□□□ 0.77
SSBP1-215ENST00000612337 ARID2Q68CP9 1835 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.84■□□□□ 0.77
SSBP1-215ENST00000612337 FAM205CA6NFA0 338 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 ASAP2O43150 1006 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 NHLH1Q02575 133 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 SIGLEC14Q08ET2 396 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 CTTNQ14247 550 aaKnown RBP19.84■□□□□ 0.77
SSBP1-215ENST00000612337 XKR9Q5GH70 373 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 CES5AQ6NT32 575 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 FERMT3Q86UX7 667 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 URGCPQ8TCY9 931 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms