RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 DAGLBQ8NCG7 672 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 SLC17A8Q8NDX2 589 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 CELF1Q92879 486 aaKnown RBP15.66■□□□□ 0.1
VPS36-207ENST00000611132 SPAG7O75391 227 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 ATP6V1G2O95670 118 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 ERP27Q96DN0 273 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 PJA2O43164 708 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 PIK3CAP42336 1068 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
VPS36-207ENST00000611132 ERVK-9P63128 1117 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 ALCAMQ13740 583 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 ZNF507Q8TCN5 953 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 NUF2Q9BZD4 464 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 REXO2Q9Y3B8 237 aaKnown RBP15.66■□□□□ 0.1
VPS36-207ENST00000611132 ZNF233A6NK53 670 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 SLC16A3O15427 465 aaKnown RBP15.66■□□□□ 0.1
VPS36-207ENST00000611132 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 NLRX1Q86UT6 975 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 TTC17Q96AE7 1141 aa15.66■□□□□ 0.1
VPS36-207ENST00000611132 PPP1R12AO14974 1030 aaPredicted RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 RNF8O76064 485 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 STK10O94804 968 aaKnown RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 MRPS35P82673 323 aaKnown RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 PPP1R2P3Q6NXS1 205 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 FGD4Q96M96 766 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 PPARGC1AQ9UBK2 798 aaKnown RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 GGA2Q9UJY4 613 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 MAD1L1Q9Y6D9 718 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 IQANK1A0A1B0GTG1 560 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 CFAP69A5D8W1 941 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 RCCD1A6NED2 376 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 TNFRSF8P28908 595 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 ARFIP2P53365 341 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 BASP1P80723 227 aaKnown RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 PREPLQ4J6C6 727 aaPredicted RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 CLEC4GQ6UXB4 293 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 FAF1Q9UNN5 650 aaPredicted RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 ALG6Q9Y672 507 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 TRAPPC3O43617 180 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 ITIH2P19823 946 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 MAPK7Q13164 816 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 IZUMO3Q5VZ72 239 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 GSDMBQ8TAX9 411 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
VPS36-207ENST00000611132 SENP1Q9P0U3 644 aa15.65■□□□□ 0.1
VPS36-207ENST00000611132 SRRM3A6NNA2 597 aaPredicted RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 H0YCG3 227 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 CREB3O43889 395 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 COPB2P35606 906 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 GRB10Q13322 594 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS36-207ENST00000611132 CEP120Q8N960 986 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 THEGQ9P2T0 379 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 SEL1LQ9UBV2 794 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 USP17L10C9JJH3 530 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 F8VZ95 297 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 H7C0C1 242 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 RNF225M0QZC1 329 aaPredicted RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 HNRNPCL1O60812 293 aaKnown RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 ATP5OP48047 213 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 DYNLT1P63172 113 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 ABCB5Q2M3G0 1257 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 BRDTQ58F21 947 aaPredicted RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 CD302Q8IX05 232 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 GINM1Q9NU53 330 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 SPATA31A3Q5VYP0 1347 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 PXDNQ92626 1479 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 HOXA13P31271 388 aaPredicted RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 YWHAEP62258 255 aaKnown RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 RASA3Q14644 834 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 LONP2Q86WA8 852 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 DEPTORQ8TB45 409 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 TTC7AQ9ULT0 858 aaPredicted RBP15.64■□□□□ 0.09
VPS36-207ENST00000611132 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 TJP3O95049 919 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 BSPRYQ5W0U4 402 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 DYDC2Q96IM9 177 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 TRAIPQ9BWF2 469 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 TRPC6Q9Y210 931 aa15.64■□□□□ 0.09
VPS36-207ENST00000611132 FOXP2O15409 715 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 PPFIA2O75334 1257 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ATG16L1Q676U5 607 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 DNAJC24Q6P3W2 148 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 ARHGAP18Q8N392 663 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 APEX2Q9UBZ4 518 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 FAM47DPA6NHR8 397 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 RTN2O75298 545 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 UBOX5O94941 541 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 KRT81Q14533 505 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 KYNUQ16719 465 aa15.63■□□□□ 0.09
VPS36-207ENST00000611132 SPICE1Q8N0Z3 855 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms