RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 CCDC85CA6NKD9 419 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 IGSF3O75054 1194 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 STC2O76061 302 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 RASGRP1O95267 797 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 C1RP00736 705 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 RGS3P49796 1198 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 SLC6A3Q01959 620 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 SP5Q6BEB4 398 aaPredicted RBP5.29□□□□□ -1.56
TARDBP-212ENST00000611008 IQSEC1Q6DN90 963 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 LRP10Q7Z4F1 713 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 SPATA5L1Q9BVQ7 753 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 KCMF1Q9P0J7 381 aa5.29□□□□□ -1.56
TARDBP-212ENST00000611008 COL11A2P13942 1736 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-212ENST00000611008 AHRRA9YTQ3 701 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 CTGFP29279 349 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 KIR2DL3P43628 341 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 FAM209AQ5JX71 171 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 ARHGEF19Q8IW93 802 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 BOLLQ8N9W6 283 aaKnown RBP5.28□□□□□ -1.56
TARDBP-212ENST00000611008 ARMC5Q96C12 935 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 COQ10AQ96MF6 247 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 CPPED1Q9BRF8 314 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-212ENST00000611008 POLR3BQ9NW08 1133 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-212ENST00000611008 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 DNAI1Q9UI46 699 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 COQ6Q9Y2Z9 468 aa5.28□□□□□ -1.56
TARDBP-212ENST00000611008 TMEM200CA6NKL6 621 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 ZNF185O15231 689 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 KLF4O43474 513 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 PRLP01236 227 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 TYRP1P17643 537 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 CXCR5P32302 372 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 PTH2RP49190 550 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 FAM189BP81408 668 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 CELF4Q9BZC1 486 aaKnown RBP5.27□□□□□ -1.57
TARDBP-212ENST00000611008 EPC1Q9H2F5 836 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 FRMD4BQ9Y2L6 1034 aa5.27□□□□□ -1.57
TARDBP-212ENST00000611008 EPN1Q9Y6I3 576 aaPredicted RBP5.27□□□□□ -1.57
TARDBP-212ENST00000611008 MYADML2A6NDP7 307 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 RNASET2O00584 256 aaKnown RBP5.26□□□□□ -1.57
TARDBP-212ENST00000611008 ADCY3O60266 1144 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 HKR1P10072 659 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 SEC24CP53992 1094 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 IRF9Q00978 393 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 RBL2Q08999 1139 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 RAB33AQ14088 237 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 FAM214AQ32MH5 1076 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 METTL24Q5JXM2 366 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 SLFN12LQ6IEE8 588 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 BMP8AQ7Z5Y6 402 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 SIMC1Q8NDZ2 872 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 TRPM5Q9NZQ8 1165 aa5.26□□□□□ -1.57
TARDBP-212ENST00000611008 MTSS1O43312 755 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
TARDBP-212ENST00000611008 HNRNPLP14866 589 aaKnown RBP eCLIP5.25□□□□□ -1.57
TARDBP-212ENST00000611008 PTTG1IPP53801 180 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 CC2D1AQ6P1N0 951 aaPredicted RBP5.25□□□□□ -1.57
TARDBP-212ENST00000611008 SPATC1Q76KD6 591 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 OVCH1Q7RTY7 1134 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 GLB1L3Q8NCI6 653 aaPredicted RBP5.25□□□□□ -1.57
TARDBP-212ENST00000611008 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 MAML3Q96JK9 1138 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 DCLRE1CQ96SD1 692 aaKnown RBP5.25□□□□□ -1.57
TARDBP-212ENST00000611008 LRFN3Q9BTN0 628 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 NDC1Q9BTX1 674 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 ZSWIM4Q9H7M6 989 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 AKIP1Q9NQ31 210 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 SYNPO2Q9UMS6 1093 aa5.25□□□□□ -1.57
TARDBP-212ENST00000611008 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 NCR1O76036 304 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 NDUFA10O95299 355 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 APOBEC3AP31941 199 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 FNTBP49356 437 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 FOXI1Q12951 378 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 VPS72Q15906 364 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 FOXB2Q5VYV0 432 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 GDF7Q7Z4P5 450 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 LILRA3Q8N6C8 439 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 ZBTB38Q8NAP3 1195 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 FAM98AQ8NCA5 519 aaKnown RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 SMG7Q92540 1137 aaKnown RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 SRPK1Q96SB4 655 aaKnown RBP5.24□□□□□ -1.57
TARDBP-212ENST00000611008 PDCD2LQ9BRP1 358 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 OSBPL2Q9H1P3 480 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 SIRPGQ9P1W8 387 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
TARDBP-212ENST00000611008 UBA6A0AVT1 1052 aaPredicted RBP5.23□□□□□ -1.57
TARDBP-212ENST00000611008 BMS1Q14692 1282 aaKnown RBP5.23□□□□□ -1.57
TARDBP-212ENST00000611008 CCDC144BQ3MJ40 725 aa5.23□□□□□ -1.57
TARDBP-212ENST00000611008 TTC38Q5R3I4 469 aa5.23□□□□□ -1.57
TARDBP-212ENST00000611008 OR52N2Q8NGI0 321 aa5.23□□□□□ -1.57
TARDBP-212ENST00000611008 SCARB1Q8WTV0 552 aa5.23□□□□□ -1.57
TARDBP-212ENST00000611008 RPGRQ92834 1020 aaKnown RBP5.23□□□□□ -1.57
TARDBP-212ENST00000611008 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.23□□□□□ -1.57
TARDBP-212ENST00000611008 HDAC5Q9UQL6 1122 aa5.23□□□□□ -1.57
TARDBP-212ENST00000611008 POLR2AP24928 1970 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms