RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 RAB27AP51159 221 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 RNASELQ05823 741 aaKnown RBP16.83■□□□□ 0.28
XRCC1-209ENST00000599693 TSGA10IPQ3SY00 556 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 MTERF2Q49AM1 385 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 LRCH2Q5VUJ6 765 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 BICD2Q8TD16 824 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 SLC5A5Q92911 643 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 FDXACB1Q9BRP7 624 aaPredicted RBP16.83■□□□□ 0.28
XRCC1-209ENST00000599693 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 FAM105AQ9NUU6 356 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 DNAJB4Q9UDY4 337 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 STK39Q9UEW8 545 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
XRCC1-209ENST00000599693 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
XRCC1-209ENST00000599693 NID2Q14112 1375 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 MEIS3P2A8K0S8 358 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
XRCC1-209ENST00000599693 EDIL3O43854 480 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 OFD1O75665 1012 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 ID4P47928 161 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 CLCN4P51793 760 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 KRT32Q14532 448 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 ANGPT1Q15389 498 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 ZNF410Q86VK4 478 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 RDM1Q8NG50 284 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 CEP89Q96ST8 783 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 RTP3Q9BQQ7 232 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 EMILIN2Q9BXX0 1053 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 NIFKQ9BYG3 293 aaKnown RBP16.82■□□□□ 0.28
XRCC1-209ENST00000599693 INO80BQ9C086 356 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-209ENST00000599693 GBP3Q9H0R5 595 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 FBXL21Q9UKT6 434 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 CACNA1AO00555 2505 aa16.82■□□□□ 0.28
XRCC1-209ENST00000599693 FRYLO94915 3013 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 IGKV6-21A0A0C4DH24 114 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 B4GALT3O60512 393 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 ZNF623O75123 536 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 DNM2P50570 870 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 XKR3Q5GH77 459 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 C15orf39Q6ZRI6 1047 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 SIX5Q8N196 739 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 DTWD2Q8NBA8 298 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 CCDC148Q8NFR7 591 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 KCNK12Q9HB15 430 aa16.81■□□□□ 0.28
XRCC1-209ENST00000599693 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 STBD1O95210 358 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
XRCC1-209ENST00000599693 CNPP09543 421 aaKnown RBP16.8■□□□□ 0.28
XRCC1-209ENST00000599693 KLRC2P26717 231 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 USP11P51784 963 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 FGD1P98174 961 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 CATSPER4Q7RTX7 472 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 CMASQ8NFW8 434 aaPredicted RBP16.8■□□□□ 0.28
XRCC1-209ENST00000599693 PGBD4Q96DM1 585 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
XRCC1-209ENST00000599693 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
XRCC1-209ENST00000599693 LILRB3O75022 631 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 PSMD10O75832 226 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 SSBP05455 408 aaKnown RBP eCLIP16.79■□□□□ 0.28
XRCC1-209ENST00000599693 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
XRCC1-209ENST00000599693 AGMOQ6ZNB7 445 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 PHKBQ93100 1093 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 GJA10Q969M2 543 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 TMEM175Q9BSA9 504 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
XRCC1-209ENST00000599693 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 PCDHB2Q9Y5E7 798 aa16.79■□□□□ 0.28
XRCC1-209ENST00000599693 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 MAFO75444 373 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-209ENST00000599693 DDHD2O94830 711 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 Q4G0T1 1027 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 B3GNT9Q6UX72 402 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 Q6ZUG5 572 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 JPH2Q9BR39 696 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-209ENST00000599693 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
XRCC1-209ENST00000599693 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
XRCC1-209ENST00000599693 NARSO43776 548 aaKnown RBP16.77■□□□□ 0.28
XRCC1-209ENST00000599693 N4BP1O75113 896 aaKnown RBP16.77■□□□□ 0.28
XRCC1-209ENST00000599693 URODP06132 367 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 BRF1Q92994 677 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 FAM193BQ96PV7 902 aaPredicted RBP16.77■□□□□ 0.28
XRCC1-209ENST00000599693 HERC2P3Q9BVR0 1158 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 RSAD1Q9HA92 442 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
XRCC1-209ENST00000599693 KANSL3Q9P2N6 904 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms