RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ZNF131P52739 623 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 SMTNP53814 917 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 TCTN1Q2MV58 587 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 PRPF38BQ5VTL8 546 aaKnown RBP21.14■□□□□ 0.97
DDX39A-214ENST00000590556 CDCA2Q69YH5 1023 aaPredicted RBP21.14■□□□□ 0.97
DDX39A-214ENST00000590556 CHRDL2Q6WN34 429 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 KRBA2Q6ZNG9 492 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 CATSPER4Q7RTX7 472 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 SPIRE2Q8WWL2 714 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 TRIM9Q9C026 710 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 MINDY3Q9H8M7 445 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 KMT5AQ9NQR1 393 aa21.14■□□□□ 0.97
DDX39A-214ENST00000590556 GOLGA6L22H0YM25 854 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 IDEP14735 1019 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 LIG1P18858 919 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 ASIC1P78348 528 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 MBTD1Q05BQ5 628 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 SNW1Q13573 536 aaKnown RBP21.13■□□□□ 0.97
DDX39A-214ENST00000590556 GRAMD1CQ8IYS0 662 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 CCDC34Q96HJ3 373 aa21.13■□□□□ 0.97
DDX39A-214ENST00000590556 ABHD14A-ACY1A0A1B0GW23 586 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 SLC16A4O15374 487 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 BAIAP3O94812 1187 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 GAP43P17677 238 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 EFNA5P52803 228 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 PCBP1Q15365 356 aaKnown RBP eCLIP21.12■□□□□ 0.97
DDX39A-214ENST00000590556 SHHQ15465 462 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 C9orf50Q5SZB4 431 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 KANK3Q6NY19 840 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 CNNM4Q6P4Q7 775 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 FAM43BQ6ZT52 329 aaPredicted RBP21.12■□□□□ 0.97
DDX39A-214ENST00000590556 CCDC65Q8IXS2 484 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 NTPCRQ9BSD7 190 aaKnown RBP21.12■□□□□ 0.97
DDX39A-214ENST00000590556 FTHL17Q9BXU8 183 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 BLZF1Q9H2G9 400 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 MTIF3Q9H2K0 278 aaKnown RBP21.12■□□□□ 0.97
DDX39A-214ENST00000590556 PANK4Q9NVE7 773 aa21.12■□□□□ 0.97
DDX39A-214ENST00000590556 ADGRA3Q8IWK6 1321 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 ZBBXA8MT70 800 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 TRAK2O60296 914 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 EFCAB14O75071 495 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 NR1I2O75469 434 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 ERLIN2O94905 339 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 CASP1P29466 404 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 CUL4BQ13620 913 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 TMX1Q9H3N1 280 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 PRMT7Q9NVM4 692 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-214ENST00000590556 SEL1LQ9UBV2 794 aa21.11■□□□□ 0.97
DDX39A-214ENST00000590556 H0YCG3 227 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 K7ERI5 159 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 GTPBP6O43824 516 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-214ENST00000590556 KINO60870 393 aaKnown RBP21.1■□□□□ 0.97
DDX39A-214ENST00000590556 MYL1P05976 194 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 NCBP1Q09161 790 aaKnown RBP21.1■□□□□ 0.97
DDX39A-214ENST00000590556 MAPK6Q16659 721 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-214ENST00000590556 SFR1Q86XK3 245 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 FAM178BQ8IXR5 827 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 RNPC3Q96LT9 517 aaKnown RBP21.1■□□□□ 0.97
DDX39A-214ENST00000590556 TIGD1Q96MW7 591 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 CCDC113Q9H0I3 377 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 PRO3102Q9H379 93 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 CHST12Q9NRB3 414 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 ARHGAP28Q9P2N2 729 aa21.1■□□□□ 0.97
DDX39A-214ENST00000590556 PHLPP2Q6ZVD8 1323 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 MICAL3Q7RTP6 2002 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 FRMD3A2A2Y4 597 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 DENND3A2RUS2 1198 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 ENPP3O14638 875 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 PRKCBP05771 671 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 ZSCAN20P17040 1043 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-214ENST00000590556 KCNJ6P48051 423 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 NCKAP1LP55160 1127 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 HAUS6Q7Z4H7 955 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 SLC17A8Q8NDX2 589 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 TMEM161BQ8NDZ6 487 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 ADAM2Q99965 735 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 FZD8Q9H461 694 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 TMEM134Q9H6X4 195 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 AGPAT5Q9NUQ2 364 aa21.09■□□□□ 0.97
DDX39A-214ENST00000590556 CXXC1Q9P0U4 656 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-214ENST00000590556 PIN4Q9Y237 131 aaKnown RBP21.09■□□□□ 0.97
DDX39A-214ENST00000590556 K7ENM7 598 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 MGEA5O60502 916 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 TSPAN1O60635 241 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 NMT1P30419 496 aaKnown RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 WDR5P61964 334 aaKnown RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 COASYQ13057 564 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 DSC3Q14574 896 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 AMHR2Q16671 573 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 FAM187BQ17R55 369 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 RASIP1Q5U651 963 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 UNC13DQ70J99 1090 aa21.08■□□□□ 0.97
DDX39A-214ENST00000590556 RTN4RL1Q86UN2 441 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-214ENST00000590556 TDHQ8IZJ6 230 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms